Showing : rTANDEM • reset
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Alternatives to perform peptide identification in Bioconductor version '3.16'?
peptide peptideidentification rTANDEM MSGFplus Alternatives
updated 2.8 years ago by 4.2k • written 2.8 years ago by ▴ 10
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rTandem compilation failed
rtandem bug compilation error
7.5 years ago Ed Siefker ▴ 230
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Fwd: rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics trigger rTANDEM Proteomics trigger rTANDEM
12.9 years ago Frederic Fournier ▴ 40
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rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics rTANDEM Proteomics rTANDEM
updated 12.9 years ago by ★ 13k • written 12.9 years ago by ▴ 40
4 results • Page 1 of 1
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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR by JKim • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release by Jeroen ▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k
I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```
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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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