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rgadem
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3
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1.7k
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Problem with rGADEM & MotIV - one matrix consensus after GADEM() and one plot enrichment motif
rgadem
motiv
chipseq
jaspar
updated 8.9 years ago by
emercier
• 0 • written 9.0 years ago by
w.jarassier
• 0
0
votes
4
replies
1.6k
views
occurrence of rGADEM motifs
rGADEM
MotIV
rGADEM
MotIV
updated 12.8 years ago by
Charles Joly Beauparlant
▴ 170 • written 12.8 years ago by
mattia pelizzola
▴ 200
0
votes
2
replies
1.5k
views
rGADEM crash
rGADEM
rGADEM
11.1 years ago
Lakshmanan Iyer
▴ 50
0
votes
1
reply
1.3k
views
ChIPpeakAnno "examplePattern.fa" file
rGADEM
MotifDb
rGADEM
MotifDb
updated 11.2 years ago by
José Luis Lavín
▴ 80 • written 11.2 years ago by
Paul Shannon
▴ 750
0
votes
1
reply
1.2k
views
rGADEM crashes on Ubuntu 10.04 64-bit
rGADEM
rGADEM
updated 12.4 years ago by
Dan Tenenbaum
★ 8.2k • written 12.4 years ago by
Dave S
▴ 10
1
vote
6
replies
1.5k
views
rGADEM not giving desired motif consistently
rGADEM
updated 8.3 years ago by
Charles Joly Beauparlant
▴ 170 • written 8.4 years ago by
vinod.acear
▴ 50
0
votes
1
reply
1.7k
views
rGADEM error retrieving sequences
rgadem
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
christopher.chaney
• 0
0
votes
0
replies
859
views
rGADEM caught segfault
software error
rgadem
caught segfault
GADEM
6.7 years ago
vgms3311
• 0
0
votes
0
replies
1.2k
views
occurrence of rGADEM motifs (mattia pelizzola)
Alignment
rGADEM
MotIV
Alignment
rGADEM
MotIV
12.8 years ago
Mercier Eloi
▴ 60
0
votes
1
reply
675
views
Error calling GADEM from rGADEM package
rGADEM
updated 12 months ago by
mohamedrefaat.1.1992
• 0 • written 18 months ago by
Nils.Rother
• 0
0
votes
0
replies
1.0k
views
occurrence of rGADEM motifs (mattia pelizzola)
Alignment
rGADEM
MotIV
Alignment
rGADEM
MotIV
12.8 years ago
Chris Whelan
▴ 60
0
votes
0
replies
1.0k
views
New version of rGADEM - ChIP-Seq, de novo motif discovery
Transcription
rGADEM
Transcription
rGADEM
12.8 years ago
Charles Joly
▴ 10
0
votes
0
replies
904
views
rGADEM crash
rGADEM
rGADEM
12.3 years ago
Arnaud Droit
▴ 20
0
votes
0
replies
1.2k
views
rGADEM: e-Values for reported motifs
rGADEM
rGADEM
11.3 years ago
Alexandra Zerck
▴ 10
0
votes
0
replies
1.4k
views
ChIPpeakAnno
rGADEM
MotIV
MotifDb
rGADEM
MotIV
MotifDb
10.2 years ago
Bahar
▴ 10
0
votes
0
replies
1.0k
views
rGADEM bit calloc error
rGADEM
8.2 years ago
emiliomastriani
• 0
16 results • Page
1 of 1
Recent ...
Replies
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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