Bioconductor Rgadem

Showing : rgadem • reset

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951

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rGADEM

updated 9 months ago by shepherl 4.3k • written 9 months ago by Jay hesselberth • 0

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1.2k

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rGADEM

updated 2.8 years ago by mohamedrefaat.1.1992 • 0 • written 3.4 years ago by Nils.Rother • 0

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1.2k

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software error rgadem caught segfault GADEM

8.5 years ago vgms3311 • 0

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2.2k

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rgadem

updated 9.0 years ago by Martin Morgan 25k • written 9.0 years ago by christopher.chaney • 0

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1.3k

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rGADEM

10.1 years ago emiliomastriani • 0

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2.1k

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rGADEM

updated 10.2 years ago by Charles Joly Beauparlant ▴ 170 • written 10.2 years ago by vinod.acear ▴ 50

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2.4k

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rgadem motiv chipseq jaspar

updated 10.8 years ago by emercier • 0 • written 10.8 years ago by w.jarassier • 0

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1.8k

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rGADEM MotIV MotifDb rGADEM MotIV MotifDb

12.0 years ago Bahar ▴ 10

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2.0k

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rGADEM rGADEM

13.0 years ago Lakshmanan Iyer ▴ 50

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1.7k

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rGADEM MotifDb rGADEM MotifDb

updated 13.0 years ago by José Luis Lavín ▴ 80 • written 13.0 years ago by Paul Shannon ▴ 750

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1.5k

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rGADEM rGADEM

13.1 years ago Alexandra Zerck ▴ 10

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1.2k

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rGADEM rGADEM

14.2 years ago Arnaud Droit ▴ 20

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1.6k

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rGADEM rGADEM

updated 14.2 years ago by Dan Tenenbaum ★ 8.2k • written 14.2 years ago by Dave S ▴ 10

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1.4k

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Transcription rGADEM Transcription rGADEM

14.6 years ago Charles Joly ▴ 10

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1.5k

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Alignment rGADEM MotIV Alignment rGADEM MotIV

14.6 years ago Mercier Eloi ▴ 60

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1.4k

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Alignment rGADEM MotIV Alignment rGADEM MotIV

14.6 years ago Chris Whelan ▴ 60

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2.2k

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rGADEM MotIV rGADEM MotIV

updated 14.6 years ago by Charles Joly Beauparlant ▴ 170 • written 14.6 years ago by mattia pelizzola ▴ 200

17 results • Page 1 of 1

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Answer: specifying refColumn in calcNormFactors() by Gordon Smyth 53k

Your question is about cross-validation rather than specifically about edgeR. A general principle of cross-validation is that you must norm…

Answer: Sex prediction in sesame for EPICV2 by Tim Peters ▴ 230

Hi Pooja, There is a tutorial for preprocessing EPICv2 via sesame here: https://clark-lab.github.io/EPICv2_tutorial/. There is no call t…

Comment: Convergence Issues and Model Selection DESeq2 by dani.guan.3 • 0

Thank you, I appreciate your time and help.

Comment: Convergence Issues and Model Selection DESeq2 by Michael Love 43k

> out of my 30,229 genes, 795 (2.6%) are better explained ... Not exactly. Frequentist statistics is not symmetric in this way. If it were…

Answer: Is it still possible to do batch correction for my data? by James W. MacDonald 68k

The balance doesn't matter. What does matter is that you have samples nested in batch, in which case you cannot reliably distinguish techni…

Votes

DiffBind dropping peaks in ATAC-seq data

A: decideTests() options in LIMMA

A: Removing cell cycle genes in large data set integration

Answer: Quick two questions on limpa

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Teacher to Gordon Smyth 53k

Popular Question to poojitha.stemcell ▴ 10

Popular Question to James W. MacDonald 68k