Bioconductor Roadmap project

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roadmap project annotationhub

8.6 years ago vanesa_1230 • 0

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AnnotationHub Epigenomics BigData RoadMap Project NIH Tutorial

updated 8.6 years ago by vanesa_1230 • 0 • written 10.5 years ago by Sonali Arora ▴ 390

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annotationhub roadmap project rpkm data.frame

9.1 years ago wcstcyx ▴ 30

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roadmap project annotationhub epigenomics big data

updated 9.6 years ago by Valerie Obenchain ★ 6.8k • written 9.6 years ago by kevin.rue ▴ 350

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

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