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data.frame
•
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0
votes
2
replies
764
views
'Killed' error during RNAseq alignment
subjunc
data.frame
myExons
Rsubread
updated 13 months ago by
ATpoint
★ 4.2k • written 13 months ago by
Sukeerthi
• 0
0
votes
1
reply
693
views
?? Any R script for subtracting multiple controls from multiple patients in data.frame and assign 1 if output is less than 0
Rscript
data.frame
forloop
R
4.0 years ago
Ankit
▴ 20
1
vote
1
reply
1.4k
views
TCGA isoform expression quantification file - how to reshape data
data.frame
tcga
reshape data
updated 5.2 years ago by
Steve Lianoglou
★ 13k • written 5.2 years ago by
mario.zanfardino
▴ 160
0
votes
1
reply
779
views
Error in data.frame for limmaCtData function
software error
limma
data.frame
updated 5.9 years ago by
Gordon Smyth
51k • written 5.9 years ago by
azmir004
• 0
0
votes
1
reply
1.0k
views
Workflow Perraudeau F1000 - Bioconductor workflow for scRNA-seq
data.frame
read.table
updated 6.3 years ago by
davide risso
▴ 950 • written 6.3 years ago by
viviana.marin-esteban
• 0
0
votes
0
replies
1.0k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.5 years ago
aokoro
• 0
3
votes
2
replies
1.7k
views
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub
roadmap project
rpkm
data.frame
7.8 years ago
wcstcyx
▴ 30
0
votes
1
reply
1.2k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
8.3 years ago
waqasnayab
• 0
6
votes
3
replies
3.5k
views
How to transform cytometry data from CSV and not FCS file?
flowcore
transform
data.frame
updated 8.3 years ago by
Jiang, Mike
★ 1.3k • written 8.3 years ago by
Julia
▴ 20
3
votes
3
replies
1.6k
views
Sorting data frame derived from GRanges
granges
data.frame
sort
updated 8.8 years ago by
Michael Lawrence
★ 11k • written 8.8 years ago by
igor
▴ 50
2
votes
2
replies
913
views
Error when add `in` column into data.frame
data.frame
updated 8.9 years ago by
Ryan C. Thompson
★ 7.9k • written 8.9 years ago by
qiuworld.ou
• 0
2
votes
6
replies
1.7k
views
edgeR output error and data frame setting
EdgeR
data.frame
glmLRT
updated 8.9 years ago by
Gordon Smyth
51k • written 8.9 years ago by
amoltej
▴ 10
12 results • Page
1 of 1
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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Lluís Revilla Sancho
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maltethodberg
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42k
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Leonardo Collado Torres
★ 1.1k
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Gordon Smyth
51k
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