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?? Any R script for subtracting multiple controls from multiple patients in data.frame and assign 1 if output is less than 0
Rscript
data.frame
forloop
R
22 months ago
Ankit
▴ 10
1
vote
1
reply
474
views
TCGA isoform expression quantification file - how to reshape data
data.frame
tcga
reshape data
updated 3.0 years ago by
Steve Lianoglou
13k • written 3.0 years ago by
mario.zanfardino
▴ 160
0
votes
1
reply
422
views
Error in data.frame for limmaCtData function
software error
limma
data.frame
updated 3.7 years ago by
Gordon Smyth
45k • written 3.7 years ago by
azmir004
• 0
0
votes
1
reply
601
views
Workflow Perraudeau F1000 - Bioconductor workflow for scRNA-seq
data.frame
read.table
updated 4.2 years ago by
davide risso
▴ 890 • written 4.2 years ago by
viviana.marin-esteban
• 0
0
votes
0
replies
525
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
4.3 years ago
aokoro
• 0
3
votes
2
replies
999
views
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub
roadmap project
rpkm
data.frame
5.6 years ago
wcstcyx
▴ 30
0
votes
1
reply
826
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
6.1 years ago
waqasnayab
• 0
4
votes
3
replies
2.5k
views
How to transform cytometry data from CSV and not FCS file?
flowcore
transform
data.frame
updated 6.1 years ago by
Jiang, Mike
★ 1.3k • written 6.1 years ago by
Julia
• 0
3
votes
3
replies
906
views
Sorting data frame derived from GRanges
granges
data.frame
sort
updated 6.6 years ago by
Michael Lawrence
11k • written 6.6 years ago by
igor
▴ 40
2
votes
2
replies
579
views
Error when add `in` column into data.frame
data.frame
updated 6.7 years ago by
Ryan C. Thompson
7.8k • written 6.7 years ago by
qiuworld.ou
• 0
2
votes
6
replies
1.1k
views
edgeR output error and data frame setting
EdgeR
data.frame
glmLRT
updated 6.8 years ago by
Gordon Smyth
45k • written 6.8 years ago by
amoltej
▴ 10
11 results • Page
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Comment: broken chain import in liftOver
by
Marcel Ramos
570
You could also try using one of the chain files in `AnnotationHub`, which gets auto-cached: ```r library(AnnotationHub) query(ah <- Annot…
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated.
by
James W. MacDonald
59k
See `removeBatchEffect` in the `limma` package.
Comment: GDCdownload Directory Problem :(
by
Marcel Ramos
570
FWIW, `TCGAutils` is not a related package.
Comment: help please!
by
1051444231
• 0
I have updated Rtools
Comment: help please!
by
1051444231
• 0
> BiocManager::install("AnnotationDbi",force = TRUE) 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' …
Votes
Answer: broken chain import in liftOver
Answer: toGRanges help!
Answer: toGRanges help!
Comment: CPM after RUVseq
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
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