Showing : big data • reset
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
3.5 years ago • updated 2.7 years ago Luo Weijun ★ 1.5k
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Job: Data Manager - BC Cancer Research Center, Vancouver BC
computational genomic big data bioinformatics Job
3.2 years ago jmaanaki • 0
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Job: Postdoctoral positions in drug discovery and genome data science
computational biology biostatistics big data data science drug discovery Job
3.5 years ago Thomas Girke ★ 1.7k
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How to handle big data sets (>10GB) in Bioconductor packages?
big data methylmix memory problem
updated 3.9 years ago by 25k • written 3.9 years ago by • 0
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584
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Subsetting Rle with ORF-sequence-positions by the 3 frames
Rle Big data coverageByTranscript
4.3 years ago hauken_heyken ▴ 80
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What is the recommended method for running WGCNA on large metatranscriptomic dataset?
wgcna transcriptome big data metagenomics gene expression
4.5 years ago jol.espinoz ▴ 40
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AnnotationHub: confusing pValue/qValue for (some) Roadmap records
roadmap project annotationhub epigenomics big data
updated 6.3 years ago by ★ 6.7k • written 6.3 years ago by ▴ 300
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Job: Postdoctoral Research Associate Position- Harvard Medical School (Probabilistic Algorithms and Software for Biomedical Big Data)
Probabilistic Algorithms Big Data Job
7.3 years ago Doe, Aimee ▴ 40
8 results • Page 1 of 1
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Comment: OPLS-DA: confidence interval for accuracy metric by etienne.thevenot ▴ 20
- The bootstrapping approach can be used to compute the CIs: see here for an example: Mendez et al. (2019). « A comparative evaluation …
Comment: Data input for aracne2regulon function in viper package by xlal • 0
You are right!And may be we should check the gene symbols cause when I open the expression matrix in EXCEL,it will change some genes into m…
Comment: unable to install.packages("spatialLIBD") by Leonardo Collado Torres ▴ 1000
All the solutions Lori proposed are valid. The `STexampleData` package I think has only 1 of our samples (see https://bioconductor.org/pack…
Answer: how to use Rsamtools to parse extra fields from STAR alignment by Martin Morgan 25k
The 'extra columns' are called 'tags' in the SAM specification. Following the documentation `?ScanBamParam` you should add `tag = "NH"`. Se…
Comment: DEXSeq: Error in reading counts from htseq "Error in FUN(X[[i]], ...) : subscrip by Delta._.43 ▴ 10
Yes, indeed it is the same error. Here are the first few lines of my count file. ``` "ENSG00000000003":"001" 0 "ENSG00000000003":"002" 1032…
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Answer: spot- vs cell-level data access
Answer: unable to install.packages("spatialLIBD")
Comment: unable to install.packages("spatialLIBD")
error running UniProt.ws
Answer: DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FU
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