Bioconductor S4vectors

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S4Vectors

written 12 months ago by Michael Steinbaugh ▴ 90

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S4Vectors

updated 7 months ago by Hervé Pagès 16k • written 7 months ago by Dario Strbenac ★ 1.5k

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S4Vectors

6 months ago GE • 0

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S4Vectors

updated 5 months ago by Hervé Pagès 16k • written 5 months ago by Dario Strbenac ★ 1.5k

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S4Vectors

updated 2 days ago by shepherl 3.9k • written 2 days ago by bounlu • 0

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Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k

In that case both time and treatment are identical things, so choose one and go with it.

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

numbers 1 to 3 represent observations and/or replicates Control is control. The three controls are shown as Control_1, control_2 and Contr…

Answer: Once again a "Model matrix not full rank" by James W. MacDonald 65k

The time and treatment are essentially the same thing, so you cannot have both in the model at the same time. Do the numbers 1:3 represent …

Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

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Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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