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scran scater scuttle

updated 5.6 years ago by Aaron Lun ★ 29k • written 5.6 years ago by enricoferrero ▴ 680

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scran SingleCellExperiment scuttle scater

updated 5.1 years ago by Aaron Lun ★ 29k • written 5.1 years ago by enricoferrero ▴ 680

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scater SingleCellExperiment BiocParallel scuttle scran

4.3 years ago enricoferrero ▴ 680

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normalizeCounts scran librarySizeFactors scuttle scRNAseq

4.0 years ago behr201 • 0

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scuttle scater seurat SpatialExperiment

3.1 years ago cathalgking ▴ 10

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scuttle scater SpatialExperiment

updated 3.1 years ago by alan.ocallaghan ▴ 160 • written 3.1 years ago by cathalgking ▴ 10

9 results • Page 1 of 1

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Answer: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k

I'm not familiar with the packages you mention, but the whole reason why Bioconductor has versions is that code and annotation change. Code…

Comment: Question on processing compound protein groups in limpa by JKim • 0

Many thanks. I appreciate your advice.

Answer: Question on processing compound protein groups in limpa by Gordon Smyth 53k

Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…

Answer: Correct usage of limpa for protein input by Gordon Smyth 53k

limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…

Comment: A problem occurs when running the monocle2 by a2a2hset32aa • 0

Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…

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Answer: Question on processing compound protein groups in limpa

Answer: Correct usage of limpa for protein input

A: Interpretaion of dendrogram height in WGCNA?

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Popular Question to Dario Strbenac ★ 1.6k

Popular Question to chirag.parsania ▴ 10