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seqgsea
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Including sva results in SeqGSEA with data with batch effect
limma
deseq2
seqgsea
sva
deseq
5.4 years ago
kentfung
▴ 20
0
votes
1
reply
1.1k
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install SeqGSEA problem
seqgsea
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
jial2
• 0
0
votes
1
reply
1.3k
views
accounting for gene length with SeqGSEA
goseq
SeqGSEA
goseq
SeqGSEA
updated 9.0 years ago by
Xi Wang
• 0 • written 11.5 years ago by
Julie Leonard
▴ 110
0
votes
3
replies
2.0k
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Running the GSEA algorithm
Microarray
GeneSetEnrichment
PGSEA
GSEABase
GSRI
SeqGSEA
Microarray
GeneSetEnrichment
GSRI
updated 10.6 years ago by
Steve Lianoglou
★ 13k • written 10.6 years ago by
Leif Väremo
▴ 70
0
votes
5
replies
3.6k
views
Running the GSEA algorithm
Infrastructure
PGSEA
GSEABase
SeqGSEA
Infrastructure
PGSEA
GSEABase
SeqGSEA
updated 10.6 years ago by
Julian Gehring
★ 1.3k • written 10.6 years ago by
enricoferrero
▴ 660
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Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data
by
Melisa Tecik
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Thanks a lot for the help. You saved my day
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