Showing : sesame • reset
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sigDF object in sesame
sesame sesameData
11 weeks ago Ramiro • 0
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13
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2.0k
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When doing differential methylation using the sesame package, seems to only go one way
methylation sesame methylationArrayAnalysis
updated 13 months ago by ▴ 20 • written 14 months ago by ▴ 10
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2
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In the sesame package, what does the estimate output mean from testEnrichment()
MethylationArray methylation sesame methylationArrayAnalysis
14 months ago ramiro.barrantes ▴ 10
0
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3
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875
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Open Sesame: in what genes are my differentially methylated probes!!
MethylationArray sesameData sesame
updated 11 months ago by • 0 • written 14 months ago by ▴ 10
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4
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2.4k
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SeSAMe DMR for EPIC V2
sesame EPICv2manifest epicv2
updated 3 months ago by • 0 • written 16 months ago by ▴ 50
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2
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2.1k
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Batch effect correction: methylome data
sesame BatchEffect MethylationArray
updated 18 months ago by ▴ 20 • written 18 months ago by • 0
3
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5
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2.2k
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Looking for equivalent EPIC chip v1 vs. v2 annotation variables
sesame IlluminaHumanMethylationEPICv2anno.20a1.hg38 methylationEPICv2.0 EpicV2
updated 19 months ago by • 0 • written 24 months ago by ▴ 10
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4
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2.1k
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sesameDataCache is not work properly on my system
sesameData sesameDataCache sesame ExperimentalHub
updated 8 months ago by • 0 • written 24 months ago by • 0
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3
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1.5k
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Difficulty creating summarized experiment
sesame sesameData
updated 3.0 years ago by ▴ 20 • written 3.0 years ago by • 0
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2
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1.6k
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How to build a GRangesList where each GRanges element is a CDS coordinate of gene transcripts?
GenomicRanges sesame sesameData GenomicFeatures
4.2 years ago Pratik Mehta ▴ 10
10 results • Page 1 of 1
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Comment: Save the Date: BioC2026 by eja.gsssssswwse.r.m • 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released! by eja.gsssssswwse.r.m • 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
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Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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