Bioconductor Sesame

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sesame sesameData

10 weeks ago Ramiro • 0

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methylation sesame methylationArrayAnalysis

updated 13 months ago by zhouwanding ▴ 20 • written 13 months ago by ramiro.barrantes ▴ 10

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MethylationArray methylation sesame methylationArrayAnalysis

13 months ago ramiro.barrantes ▴ 10

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MethylationArray sesameData sesame

updated 11 months ago by alyssa-daniel • 0 • written 14 months ago by ramiro.barrantes ▴ 10

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sesame EPICv2manifest epicv2

updated 3 months ago by MargaretJDinan • 0 • written 16 months ago by luca.s ▴ 50

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sesame BatchEffect MethylationArray

updated 17 months ago by zhouwanding ▴ 20 • written 18 months ago by Seungmin • 0

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sesame IlluminaHumanMethylationEPICv2anno.20a1.hg38 methylationEPICv2.0 EpicV2

updated 19 months ago by aldea85 • 0 • written 24 months ago by Courtney ▴ 10

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sesameData sesameDataCache sesame ExperimentalHub

updated 7 months ago by Samreen • 0 • written 24 months ago by alos_diallo • 0

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sesame sesameData

updated 2.9 years ago by zhouwanding ▴ 20 • written 2.9 years ago by jasmine_chappell • 0

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1.6k

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GenomicRanges sesame sesameData GenomicFeatures

4.1 years ago Pratik Mehta ▴ 10

10 results • Page 1 of 1

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Answer: Integration: Paired-end vs healthy single-end from a different source by wba64023 • 0

Interesting comparison! The source differences can definitely impact read quality and bias. Curious to see how you handle normalization bet…

Comment: Could we detect difference at pathway level but not significant different at gen by wba64023 • 0

thanks for sharing! [slope 2][1] [1]: https://slope2.online

Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0

The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …

Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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Popular Question to Fred Hutch (Recruiting) ▴ 40