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singlecellRNA-Seq
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Job:
Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq
pathview
statistics
R
3.7 years ago • updated 3.6 years ago
Luo Weijun
★ 1.6k
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Job:
Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R
statistics
pathview
singlecellRNA-Seq
4.0 years ago • updated 3.7 years ago
Luo Weijun
★ 1.6k
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Answer: git push errors
by
James W. MacDonald
67k
This is a question for the bioc-devel listserv (bioc-devel@r-project.org) rather than the support site. However, it looks like you are s…
Comment: How to annotate a limma Elist raw class object with an annotation file
by
James W. MacDonald
67k
Oh right. My bad. Good for you though, figuring out that it's ENTREZID, not ENTREZGENE. You did a good job of reading the error message in …
Comment: Differential Expression Genes as Independent Variables
by
James W. MacDonald
67k
Both true, so a poor suggestion on my part. I am also unclear as to how one would use a single observation (the gene expression measures)…
Answer: How to annotate a limma Elist raw class object with an annotation file
by
giulia.gentile
• 0
Good afternoon, Thank you for your explanation and suggestion to overcome the issue by annotating directly from the genome-wide annotation…
Comment: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
by
Aaron Lun
★ 28k
IIRC loading ~million cells into memory took about 3-5 minutes, but that was with a rather slow filesystem (HDD on a HPC), so YMMV dependin…
Votes
QSEA- Extraction of Normalized methylation across the samples
Comment: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
A: DESeq2 One-way ANOVA with 3 sample groups?
conumee with Infinium MethylationEPIC v2.0
A: How to bin a GRanges to small bins
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