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Database for exploring annotations of the coding genome at variants, such as candidate regulatory SNPs at disease-associated loci.
SNP
ExomeSeqData
snapcount
SNAData
SNPRelate
3 months ago
m610110001
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1.0k
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Bug report: Help pages for degree (package graph) not displayed
Cancer
graph
SNAData
Cancer
graph
SNAData
updated 14.8 years ago by
Patrick Aboyoun
1.6k • written 14.8 years ago by
Martin Morgan
25k
0
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681
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Bug report: Help pages for degree (package graph) not displayed
graph
SNAData
graph
SNAData
14.8 years ago
Zembower, Kevin
▴ 50
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Answer: Log2Fold change interpretation - Continuous predictor variable
by
Michael Love
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It can be more sensitive than binary versions, this has been written about in statistical literature. But most of all I would encourage …
Comment: DESeq2 and heatmap for multiple comparisons
by
artem.vorobyev
• 0
this I already did. My question is how to visualize differentially expressed genes on the heatmap for all 3 groups (healty->lesion->treat…
Comment: athPkgBuilder data source :missing probesets
by
nicklesteele532
• 0
> >>> > >>> How to handle the one probeset to multiple locus mappings? I can > >think 3 > >>> possible solutions: > >>> 1. pick the "best" …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
> sum(width(gr_toexclude)) [1] 2713499861 I excluded everything which was not locus. If small rna locus is from 2000 to 4000 and next locu…
Comment: Why in Bioconductor community people rarely upvote questions?
by
Hervé Pagès
16k
BTW I fail to see how the lack of upvotes to a question would be discouraging as long as you get a good answer. OTOH I can see how failing …
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Comment: recount 3 protect read length metadata
Answer: Doubts about manipulation and annotation of microarray files deposited at GEO
C: Batch correction in DESeq2
Comment: Strand information in a GAlignmentsList object derived from strand-specific pair
Comment: Strand information in a GAlignmentsList object derived from strand-specific pair
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