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spade
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reset
2
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13
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Issues connecting with R 3.2.2 to source("http://bioconductor.org/biocLite.R")
spade
8.5 years ago
frostbite907
• 0
0
votes
2
replies
2.0k
views
Unable to follow example SPADE usage - Cannot create iterator, invalid vertex id
igraph
spade
updated 6.9 years ago by
johnheath346
• 0 • written 8.4 years ago by
duncanjamesmurray01
• 0
0
votes
4
replies
1.6k
views
Why SPADE package has been removed from bioconductor?
spade
release
remove
clustering
updated 6.0 years ago by
James W. MacDonald
65k • written 6.0 years ago by
a.n.horvath
• 0
0
votes
1
reply
1.1k
views
Algorithm fail to generate CSV file
R
flowjo
spade
updated 7.5 years ago by
James W. MacDonald
65k • written 7.5 years ago by
maria_him4ever
• 0
0
votes
1
reply
1.0k
views
Version 1.10 of spade appears to be non-compatible with Cytoscape 2.8.x
spade
spade
updated 10.1 years ago by
Michael Linderman
▴ 10 • written 10.1 years ago by
Guest User
★ 13k
0
votes
0
replies
832
views
How to find frequent sequences.
spade
spade
11.8 years ago
Guest User
★ 13k
0
votes
0
replies
777
views
Interpreting Spade analysis results
spade
7.0 years ago
Pankaj Agarwal
▴ 100
7 results • Page
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Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Mike Smith
★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★ 3.3k
From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …
Comment: deseq2 results
by
ATpoint
★ 4.1k
> the results are not satisfactory to me Well, what is your question? The DESeq2 vignette covers how to do analysis, and some diagnostics…
Comment: Extremely small p-values using Limma for proteomic data
by
ATpoint
★ 4.1k
It's not an implementation problem I am discussing (it's trivial obviously) -- more that for most purposes the y-axis metric should be the …
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
Answer: Cannot connect to ExperimentHub server
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