Bioconductor Splicewiz

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alternativeSplicingEvents.hg38 AlternativeSplicing SpliceWiz

6 months ago rachel.a.shoemaker • 0

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SpliceWiz

19 months ago yyu109 • 0

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SpliceWiz

updated 2.6 years ago by a.wong ▴ 10 • written 2.6 years ago by reza.rahman • 0

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SpliceWiz

updated 15 months ago by giulia.nicoletto.1 • 0 • written 2.7 years ago by chiara.caprioli • 0

4 results • Page 1 of 1

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Comment: Merge multiple genomic intervals if overlapping more than xx percents by Lime • 0

I think this site is very useful if you are doing similar work (genomic intervals, peaks, ChIP-seq, etc.) because: There is sample code tha…

Comment: How to do simple Fisher' exact test for overlapped genomic interval in R? by Mina • 0

If I were you, I would do the following to make sure: Collect the overlapping regions into two BED files or two datasets. Use bedtools merg…

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Apologies for not clarifying earlier, you're right: it is a PCA, not an MDS. In local machine, computing the MDS takes quite a long time, P…

Answer: replace cat with message in glmTreat when lfc = 0 by Gordon Smyth 53k

Yes, I agree that the message should be a `message` rather than `cat` output, and the message is perhaps not needed at all, because anyone …

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k

How did you make this plot? I've never seen an MDS plot from limma/edgeR with axis scale going from -200 to 200. Personally, I would go ah…

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Comment: readDNAStringSet with non DNA characters

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

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