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Syntenet error in infer_syntenet() Error in blast_list[[1]] : subscript out of bounds
syntenet
updated 12 months ago by ▴ 40 • written 14 months ago by • 0
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531
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question about data processing for syntenet
syntenet
updated 12 months ago by ▴ 40 • written 14 months ago by • 0
0
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4
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573
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Error in classify_gene_pairs
syntenet doubletrouble
12 months ago hfyuan2016 • 0
0
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2
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896
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MIcrosynteny block information - Syntenet
syntenet microsynteny blocks synteny
written 20 months ago by • 0
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1
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889
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Syntenet application to bacterial genome and file processing
syntenet Bacteria synteny
updated 15 months ago by ▴ 40 • written 17 months ago by • 0
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10
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2.7k
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Interprteting the phylogenomic profiles plot
syntenet synteny Network
written 2.3 years ago by • 0
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3
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1.0k
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Clustering coefficient of synteny network
Network syntenet Clustering coefficient
20 months ago Alexandros • 0
2
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8
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1.9k
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Reading GFF file and pre-processing, run iinfer_syntenet(), input and output
syntenet
updated 14 months ago by • 0 • written 2.2 years ago by • 0
8 results • Page 1 of 1
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Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k
We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…
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It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…
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I have received a response from Ensembl regarding the items I have listed above. I wanted to post it here and will continue to post update…
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Unfortunately you did not show how you generated your input data (the object `enrichment`), nor did you show the output from `sessionInfo()…
Answer: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k
I think this is because Ensembl can assign different Gene IDs to "the same gene" if it is found both on a standard chromosome and a scaffol…
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clusterProfiler-GO enrichment Error
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