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test fisher exact
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0
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2.5k
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Please help with workspace error in R
R
test fisher exact
workspace
updated 6.9 years ago by
Aaron Lun
★ 29k • written 6.9 years ago by
Sara
▴ 20
2
votes
10
replies
2.0k
views
How to get DE relative to a fold-change threshold in single factor experiments
edgeR
deanalysis
test fisher exact
updated 7.6 years ago by
Aaron Lun
★ 29k • written 7.6 years ago by
thkapell
▴ 10
2
votes
2
replies
1.5k
views
Collapse FDR value of probes detecting the same gene
test fisher exact
EmpiricalBrownsMethod
affy
updated 9.6 years ago by
Gordon Smyth
53k • written 9.6 years ago by
tofukaj
• 0
3
votes
5
replies
3.3k
views
How to do simple Fisher' exact test for overlapped genomic interval in R?
test fisher exact
r
findoverlapsofpeaks
written 9.7 years ago by
Jurat Shahidin
▴ 80
0
votes
4
replies
2.0k
views
fisher exact snp
test fisher exact
11.0 years ago
sleidymagaly
• 0
5 results • Page
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Comment: Help with defining groups
by
Phinney, Brett
▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness
by
massimo
• 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package
by
ksankaran
• 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
by
ATpoint
★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
by
ATpoint
★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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