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tpp
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2
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14
replies
2.6k
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hyperlink issue with a R package
TPP
6.6 years ago
Bioinformatics
▴ 30
1
vote
1
reply
1.3k
views
what is this error for TPP package
TPP
updated 6.7 years ago by
Pariksheet Nanda
▴ 120 • written 6.7 years ago by
Nemo
▴ 80
1
vote
2
replies
1.1k
views
how to obtain the curve fitting for all proteins
tpp
updated 7.6 years ago by
dchilds
▴ 40 • written 7.6 years ago by
Bioinformatics
▴ 30
2
votes
3
replies
1.1k
views
error using the TTP package
TPP
updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
Bioinformatics
▴ 30
0
votes
2
replies
1.0k
views
How can I find which proteins are unaffected, stabilized or destabilized and graph them together?
TPP
updated 7.6 years ago by
dchilds
▴ 40 • written 7.6 years ago by
Bioinformatics
▴ 30
0
votes
1
reply
696
views
TPP and NPARC: A problem about the conversion of data frame.
TPP
NPARC
updated 3.5 years ago by
nils.kurzawa
▴ 20 • written 3.5 years ago by
yangwanqi
• 0
0
votes
0
replies
630
views
TPP error message " The names of the data objects in 'data' differ from the names given in the Experiment column of 'configTable'."
software error
TPP
updated 5.3 years ago by
shepherl
3.8k • written 5.3 years ago by
kkim369
• 0
0
votes
1
reply
377
views
TPP- data input
TPP
updated 4.1 years ago by
Gordon Smyth
50k • written 4.1 years ago by
esmaeil.dehghan
• 0
8 results • Page
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Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
• 0
Thank for your response. It is Illumina 450 K. I use this code ```{r } library(IlluminaHumanMethylation450kanno.ilmn12.hg19) annotat…
Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★ 5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Votes
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
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