Biostar Warnings

Showing : warnings • reset

votes

replies

1.5k

views

software error warnings synapter

7.5 years ago sogueta • 0

votes

replies

960

views

limma batchcorrect warnings

updated 3.2 years ago by Aaron Lun ★ 27k • written 3.2 years ago by xingxd16 ▴ 20

vote

replies

1.1k

views

DEXSeq warnings dexseq_count

updated 6.1 years ago by Darya Vanichkina ▴ 120 • written 6.1 years ago by Assa Yeroslaviz ★ 1.5k

votes

replies

669

views

rna-seq deseq2 warnings nbinomWaldTest transformation

updated 23 months ago by Michael Love 37k • written 23 months ago by andreia • 0

vote

replies

886

views

warnings gostats

updated 7.1 years ago by James W. MacDonald 60k • written 7.1 years ago by jon.young • 0

votes

1.0k

views

cmd check warnings s3

updated 5.8 years ago by Gordon Smyth 45k • written 5.8 years ago by anthonycolombo60 • 0

6 results • Page 1 of 1

Recent ...

Replies

Comment: Italicise by Pau • 0

They're the same: example of the vignette: "italic('VCAM1')" and result from my data: "italic('CARS1')" As I am running against time be…

Comment: Can Differential Isoform expression analysis can be performed using DESeq2 packa by priyanka.m • 0

Thank you for the suggestions. I will try to compare my results and accordingly interpret the two.

Answer: [sva] Error in density.default(x, adjust = adj) : 'x' contains missing values by wahaha • 0

I found the reason, because some gene expression levels are 0 in all samples. you can add these code to check the data: >exp_mean <- appl…

Answer: DESeq2 how to specify contrast to test difference of differences by Nicole • 0

The comment from @mikelove about specifying numeric contrasts answered my question. This code is not standalone, but I will leave it here i…

Comment: DESeq2 how to specify contrast to test difference of differences by Nicole • 0

Thank you, @mikelove - that did it! The results make sense now. From my original post, could you clarify what the `group1w.sexfemale` contr…

Votes

Answer: DESeq2 how to specify contrast to test difference of differences

Comment: DESeq2 how to specify contrast to test difference of differences

Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a

Answer: biomaRt error unable to fix: need help troubleshooting

Answer: edgeR : results from goana and kegga functions show opposite sig. p-value

Awards • All

Scholar to Nicole • 0

Teacher to Michael Love 37k