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Showing :
questions
0
votes
0
replies
1.1k
views
Updated affy package? ReadAffy/ AffyBatch has changed and breaks my pipeline!
Cancer
cdf
probe
affy
gcrma
AnnotationDbi
Cancer
cdf
probe
affy
gcrma
AnnotationDbi
12.2 years ago
Benjamin Otto
▴ 830
0
votes
4
replies
1.2k
views
R/Bioconductor CDF to Affymetrix CDF
cdf
convert
cdf
convert
updated 12.5 years ago by
Benjamin Otto
▴ 10 • written 12.5 years ago by
Benjamin Otto
▴ 830
0
votes
0
replies
758
views
AffyProbeMiner Mouse 4302 geneccds CDF file
cdf
cdf
12.9 years ago
Benjamin Otto
▴ 830
0
votes
1
reply
1.3k
views
Bootstrapping paired samples and tiny groups
ASSIGN
ASSIGN
updated 13.6 years ago by
Naomi Altman
★ 6.0k • written 13.6 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
1.1k
views
No changes between Groups using GeneST Arrays from Affymetrix
GO
vsn
plier
GO
vsn
plier
updated 14.0 years ago by
Mike Walter
▴ 230 • written 14.0 years ago by
Benjamin Otto
▴ 830
0
votes
4
replies
1.5k
views
PCR Validation threshold in dChip normalized data
updated 15.7 years ago by
Sean Davis
21k • written 15.7 years ago by
Benjamin Otto
▴ 830
0
votes
5
replies
1.2k
views
gains and losses via mode shifting
CGH
CGH
updated 15.8 years ago by
Sean Davis
21k • written 15.8 years ago by
Benjamin Otto
▴ 830
0
votes
0
replies
541
views
Promotor enrichment analysis
16.0 years ago
Benjamin Otto
▴ 830
0
votes
1
reply
888
views
RMA biomodality, distribution and transformation
updated 16.3 years ago by
Claus Mayer
▴ 340 • written 16.3 years ago by
Benjamin Otto
▴ 830
0
votes
3
replies
2.2k
views
Minimal group sizes in permutation tests
updated 16.5 years ago by
Claus Mayer
▴ 340 • written 16.5 years ago by
Benjamin Otto
▴ 830
0
votes
2
replies
3.3k
views
p.adjust returns one uniform value
updated 16.7 years ago by
Jenny Drnevich
★ 2.2k • written 16.7 years ago by
Benjamin Otto
▴ 830
0
votes
15
replies
2.4k
views
heatmap.2
updated 16.7 years ago by
Max Kauer
▴ 140 • written 16.7 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
1.2k
views
Imputation problem in aCGH
aCGH
Biobase
multtest
impute
aCGH
aCGH
Biobase
multtest
impute
aCGH
16.8 years ago
Benjamin Otto
▴ 830
0
votes
0
replies
970
views
Pvalue permutation of Linear regression
Regression
Regression
16.8 years ago
Benjamin Otto
▴ 830
0
votes
5
replies
1.4k
views
Manufacturer ids in lumiHumanV1
Annotation
lumiHumanV1
annotate
lumi
Annotation
lumiHumanV1
annotate
lumi
updated 16.8 years ago by
Pan Du
★ 1.2k • written 16.8 years ago by
Benjamin Otto
▴ 830
0
votes
0
replies
717
views
Regressions in multtest
Regression
Regression
16.8 years ago
Benjamin Otto
▴ 830
0
votes
3
replies
1.5k
views
Gene Database Files (eg gene2accession) complete?
updated 17.2 years ago by
Nianhua Li
▴ 870 • written 17.2 years ago by
Benjamin Otto
▴ 830
0
votes
3
replies
1.6k
views
Z-score
updated 17.2 years ago by
William Shannon
▴ 280 • written 17.2 years ago by
Benjamin Otto
▴ 830
0
votes
5
replies
1.1k
views
AnnBuilders paseData() doesn't recognize ACCs with underscore?
updated 17.3 years ago by
John Zhang
★ 2.9k • written 17.3 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
789
views
AnnBuilder error: parseData can't access some tmp file
AnnBuilder
PROcess
biomaRt
AnnBuilder
PROcess
biomaRt
updated 17.4 years ago by
Nianhua Li
▴ 870 • written 17.4 years ago by
Benjamin Otto
▴ 830
0
votes
7
replies
1.3k
views
Where do I find the golub_Train dataset?
updated 17.4 years ago by
Seth Falcon
★ 7.4k • written 17.4 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
719
views
Probe Interrogation Positions of Affy chips
Normalization
probe
Normalization
probe
updated 17.4 years ago by
James W. MacDonald
65k • written 17.4 years ago by
Benjamin Otto
▴ 830
0
votes
3
replies
1.3k
views
significance of "wrong" clustering of differential genes
Clustering
limma
Clustering
limma
updated 17.5 years ago by
Naomi Altman
★ 6.0k • written 17.5 years ago by
Benjamin Otto
▴ 830
0
votes
2
replies
300
views
contrasting cluster images
17.5 years ago
Benjamin Otto
▴ 830
0
votes
1
reply
536
views
F-test vs.T-test-on-differences
updated 17.5 years ago by
Naomi Altman
★ 6.0k • written 17.5 years ago by
Benjamin Otto
▴ 830
0
votes
2
replies
1.0k
views
lmFit(eset,design) error message
updated 17.5 years ago by
James W. MacDonald
65k • written 17.5 years ago by
Benjamin Otto
▴ 830
0
votes
2
replies
1.2k
views
Display Chromosome-bands in a plot
biomaRt
biomaRt
updated 17.8 years ago by
Oosting, J. PATH
▴ 550 • written 17.8 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
836
views
Test: Treatment leads to more variance in groups?
updated 17.8 years ago by
Wolfgang Huber
★ 13k • written 17.8 years ago by
Benjamin Otto
▴ 830
0
votes
0
replies
902
views
W: unnormalised vs normalised distribution
Cancer
gcrma
PICS
Cancer
gcrma
PICS
17.9 years ago
Benjamin Otto
▴ 830
0
votes
0
replies
686
views
Welch approximation: Degrees of freedom impact on pvalues
17.9 years ago
Benjamin Otto
▴ 830
0
votes
2
replies
783
views
unnormalised vs normalised distribution
gcrma
gcrma
updated 17.9 years ago by
Jenny Drnevich
★ 2.2k • written 17.9 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
841
views
magnifying genenames in pamr.plotcen()
pamr
pamr
updated 18.1 years ago by
James W. MacDonald
65k • written 18.1 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
993
views
Differences: mas5/mas5calls vs. call.expr/pairwise.comparison
affy
simpleaffy
affy
simpleaffy
18.2 years ago
Benjamin Otto
▴ 830
0
votes
0
replies
530
views
Affy: Increase/Decrease two sided Wilcoxons test
probe
affy
probe
affy
18.4 years ago
Benjamin Otto
▴ 830
0
votes
9
replies
1.3k
views
Masking single Oligos in mas5
oligo
oligo
updated 18.4 years ago by
Jenny Drnevich
★ 2.2k • written 18.4 years ago by
Benjamin Otto
▴ 830
0
votes
1
reply
698
views
Problems checking code for "computeExprSet"
updated 18.4 years ago by
Stephen Henderson
★ 1.0k • written 18.4 years ago by
Benjamin Otto
▴ 830
36 results • Page
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