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1.5k
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enrichGO (clusterProfiler) produces different results
chipseq go enrichment clusterprofiler
updated 6.2 years ago by ★ 1.2k • written 6.2 years ago by ▴ 840
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4.5k
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Comment: C: error in sort.int , 'x' must be atomic in affy::boxplot
7.2 years ago Javier Pérez Florido ▴ 840
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1
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4.5k
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Comment: C: error in sort.int , 'x' must be atomic in affy::boxplot
7.2 years ago Javier Pérez Florido ▴ 840
0
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4
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4.5k
views
error in sort.int , 'x' must be atomic in affy::boxplot
affy package boxplot hgu133plus2 oligo package
updated 7.2 years ago by 65k • written 7.2 years ago by ▴ 840
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1
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1.4k
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Comment: C: contrast matrix design for a comparison (trend) of drug concentrations
7.5 years ago Javier Pérez Florido ▴ 840
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4
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1.4k
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contrast matrix design for a comparison (trend) of drug concentrations
limma contrast matrix affymetrix microarrays limma
updated 7.5 years ago by ★ 28k • written 7.5 years ago by ▴ 840
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0
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1.1k
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Comment: C: strange pseudo-image plot from MoGene 2.0 array
7.5 years ago Javier Pérez Florido ▴ 840
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2
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1.1k
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strange pseudo-image plot from MoGene 2.0 array
pseudoimage oligo affymetrix mouse gene arrays oligo package
updated 7.5 years ago by 65k • written 7.5 years ago by ▴ 840
2
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2
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1.8k
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Affymetrix mogene 2.0 annotation data vs 2.1
affymetrix mouse gene arrays
updated 8.6 years ago by ★ 4.0k • written 8.6 years ago by ▴ 840
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1
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1.8k
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Comment: C: get al microRNA target sites for a given gene
11.6 years ago Javier Pérez Florido ▴ 840
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4
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1.8k
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get al microRNA target sites for a given gene
microRNA microRNA
updated 11.6 years ago by 65k • written 11.6 years ago by ▴ 840
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2
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1.8k
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differences among pd.mogene.1.0.st.v1, mogene10sttranscriptcluster.db and mogene10stprobeset.db
Annotation oligo Annotation oligo
updated 11.6 years ago by 65k • written 11.6 years ago by ▴ 840
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1
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1.2k
views
boxplot/histograms on preprocessed SNP affy data with crlmm package
SNP oligo crlmm SNP oligo crlmm
updated 11.9 years ago by ★ 4.3k • written 11.9 years ago by ▴ 840
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1.7k
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Is there an R package to export genotype data to PED /MAP files?
affy convert affy convert
11.9 years ago Javier Pérez Florido ▴ 840
0
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1
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1.1k
views
oligo: error in crlmm function
SNP oligo SNP oligo
updated 12.0 years ago by ★ 4.3k • written 12.0 years ago by ▴ 840
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4
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1.5k
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Definition of probes in lumiHumanAll annotation database
Annotation Annotation
updated 12.1 years ago by ▴ 350 • written 12.1 years ago by ▴ 840
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0
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1.5k
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Comment: C: Definition of probes in lumiHumanAll annotation database
12.1 years ago Javier Pérez Florido ▴ 840
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1
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1.1k
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Comment: C: some questions about lumi package and Illumina arrays
12.1 years ago Javier Pérez Florido ▴ 840
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3
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1.1k
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some questions about lumi package and Illumina arrays
Normalization probe limma lumi Normalization probe limma lumi
updated 12.1 years ago by ★ 3.6k • written 12.1 years ago by ▴ 840
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0
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1.3k
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optimizing class weights in e1071
12.2 years ago Javier Pérez Florido ▴ 840
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2
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1.8k
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problems using the latest version of e1071 (svm)
updated 12.2 years ago by 21k • written 12.2 years ago by ▴ 840
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1
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2.9k
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svm (e1071) class weighting in a multi-class problem
updated 12.2 years ago by ★ 13k • written 12.2 years ago by ▴ 840
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1
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1.6k
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Comment: C: Human Gene array data analysis workflow
13.1 years ago Javier Pérez Florido ▴ 840
0
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3
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1.6k
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Human Gene array data analysis workflow
Normalization Normalization
updated 13.1 years ago by ★ 3.9k • written 13.1 years ago by ▴ 840
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1
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1.8k
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Comment: C: two questions regarding Human Gene 1.0 ST arrays
13.1 years ago Javier Pérez Florido ▴ 840
0
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1
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1.8k
views
Comment: C: two questions regarding Human Gene 1.0 ST arrays
13.1 years ago Javier Pérez Florido ▴ 840
2
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5
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1.8k
views
two questions regarding Human Gene 1.0 ST arrays
Normalization Normalization
updated 13.1 years ago by ★ 3.9k • written 13.1 years ago by ▴ 840
0
votes
1
reply
951
views
differences between "manual" boxplots and "standard" boxplots of a oligo object
oligo oligo
updated 13.1 years ago by ★ 4.3k • written 13.1 years ago by ▴ 840
0
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1
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1.1k
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Comment: C: error in hugene10sttranscriptcluster
13.1 years ago Javier Pérez Florido ▴ 840
0
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1
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1.1k
views
Comment: C: error in hugene10sttranscriptcluster
13.1 years ago Javier Pérez Florido ▴ 840
0
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5
replies
1.1k
views
error in hugene10sttranscriptcluster
GO GO
updated 13.1 years ago by 65k • written 13.1 years ago by ▴ 840
0
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1
reply
819
views
Protein microarray analysis using Bioconductor
updated 13.9 years ago by ★ 13k • written 13.9 years ago by ▴ 840
0
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1
reply
834
views
phenotypic information of ALLMLL data set
hgu133a hgu133a
updated 14.0 years ago by ★ 13k • written 14.0 years ago by ▴ 840
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0
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586
views
justPlier default options
Normalization Normalization
14.0 years ago Javier Pérez Florido ▴ 840
0
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3
replies
1.4k
views
Comment: C: Human Gene ST using oligo package
14.0 years ago Javier Pérez Florido ▴ 840
0
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6
replies
1.4k
views
Human Gene ST using oligo package
Annotation oligo Annotation oligo
updated 14.0 years ago by ★ 4.3k • written 14.0 years ago by ▴ 840
0
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0
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718
views
Sequence analysis techniques in Bioconductor
Arabidopsis thaliana Arabidopsis thaliana
14.0 years ago Javier Pérez Florido ▴ 840
0
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0
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1.6k
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Comment: C: Problems in MAplot for affybatch objects
14.1 years ago Javier Pérez Florido ▴ 840
0
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11
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1.6k
views
Problems in MAplot for affybatch objects
updated 14.1 years ago by ★ 1.2k • written 14.1 years ago by ▴ 840
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0
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831
views
Accessing median and IQR values of MAplots
affyPLM affyPLM
14.1 years ago Javier Pérez Florido ▴ 840
0
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1
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1.1k
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Comment: C: checking multi-modalities in histograms
14.1 years ago Javier Pérez Florido ▴ 840
0
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5
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1.1k
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checking multi-modalities in histograms
updated 14.1 years ago by ★ 13k • written 14.1 years ago by ▴ 840
0
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0
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1.1k
views
Comment: C: checking multi-modalities in histograms
14.1 years ago Javier Pérez Florido ▴ 840
0
votes
1
reply
835
views
building annotation package for porcine
Annotation Cancer genefilter limma Annotation Cancer genefilter limma
updated 14.2 years ago by ★ 7.2k • written 14.2 years ago by ▴ 840
0
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6
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1.2k
views
farms package fails on estrogen data
Preprocessing Preprocessing
updated 14.2 years ago by 25k • written 14.2 years ago by ▴ 840
0
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0
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1.2k
views
Comment: C: function handle in R
14.3 years ago Javier Pérez Florido ▴ 840
0
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2
replies
1.2k
views
function handle in R
convert convert
updated 14.3 years ago by 6.7k • written 14.3 years ago by ▴ 840
0
votes
2
replies
792
views
Improvements on GCRMA function
gcrma gcrma
updated 14.3 years ago by ▴ 260 • written 14.3 years ago by ▴ 840
0
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2
replies
2.8k
views
function handle in R
updated 14.3 years ago by ▴ 50 • written 14.3 years ago by ▴ 840
0
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0
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1.4k
views
Answer: A: running out of memory
14.3 years ago Javier Pérez Florido ▴ 840
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