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Factorial experiment: No degree of freedom in maanova
maanova maanova
updated 16.2 years ago by ▴ 450 • written 16.2 years ago by ★ 6.0k
0
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0
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823
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2 conditions time series with different number of sample at each time point
TimeCourse limma timecourse maanova TimeCourse limma timecourse maanova
16.3 years ago Naomi Altman ★ 6.0k
0
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0
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543
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affy Package
oligo oligo
16.4 years ago Naomi Altman ★ 6.0k
0
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1
reply
1.0k
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Arabidopsis GO Pie Charts
goTools Category goTools Category
16.6 years ago Naomi Altman ★ 6.0k
0
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3
replies
783
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GOstat with replicates
updated 16.7 years ago by ★ 7.4k • written 16.7 years ago by ★ 6.0k
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0
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1000
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Problem when comparing a large experimental group versus a small control group by using SAM
Bayesian Bayesian
16.7 years ago Naomi Altman ★ 6.0k
0
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2
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1.1k
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Can subject be treated as fixed effect in linear model with microarray data
Microarray limma Microarray limma
updated 17.0 years ago by ▴ 20 • written 17.0 years ago by ★ 6.0k
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0
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740
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Normalization across different tissues for Affymetrix Array
Normalization Lung Normalization Lung
17.1 years ago Naomi Altman ★ 6.0k
0
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1
reply
418
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hyperGTest
updated 17.1 years ago by 65k • written 17.1 years ago by ★ 6.0k
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0
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1.1k
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suggestion about a split-plot factorial design with limma
GO limma GO limma
17.2 years ago Naomi Altman ★ 6.0k
0
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0
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503
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Fwd: Re: rcor.test
17.3 years ago Naomi Altman ★ 6.0k
0
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2
replies
1.1k
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rcor.test
updated 17.3 years ago by ▴ 20 • written 17.3 years ago by ★ 6.0k
0
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5
replies
816
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Odds Ratio in GOstat
updated 17.4 years ago by ★ 7.4k • written 17.4 years ago by ★ 6.0k
0
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7
replies
1.3k
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KEGGSOAP
KEGGSOAP KEGGSOAP
updated 17.5 years ago by ▴ 870 • written 17.5 years ago by ★ 6.0k
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5
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930
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GOstat
updated 17.5 years ago by ▴ 380 • written 17.5 years ago by ★ 6.0k
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0
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890
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Fwd: Re: limma - moderated F for one-way anova
limma limma
17.5 years ago Naomi Altman ★ 6.0k
0
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0
replies
1.2k
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microarray analysis of a dose response * strain experiment
Microarray affy limma maSigPro DOSE BRAIN Microarray affy limma maSigPro DOSE BRAIN
17.5 years ago Naomi Altman ★ 6.0k
0
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0
replies
540
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Plot, plot and keep on plotting (follow-up to loess and limma)
17.7 years ago Naomi Altman ★ 6.0k
0
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0
replies
574
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Fwd: Re: How to Change labels to a print-tip boxplot ?
limma limma
18.2 years ago Naomi Altman ★ 6.0k
0
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0
replies
661
views
Fwd: Re: Scaling Factor for Affymetrix chips.
GO probe affy gcrma GO probe affy gcrma
18.2 years ago Naomi Altman ★ 6.0k
0
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0
replies
896
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Fwd: Re: implementing limma with several sistematic effects
limma limma
18.2 years ago Naomi Altman ★ 6.0k
0
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0
replies
777
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Normalization
Microarray Normalization Microarray Normalization
18.2 years ago Naomi Altman ★ 6.0k
0
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1
reply
699
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Normalizing by Within Condition - a bad idea
limma limma
updated 18.2 years ago by ★ 6.5k • written 18.2 years ago by ★ 6.0k
0
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2
replies
916
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RMA - answer found
updated 18.3 years ago by ★ 2.0k • written 18.3 years ago by ★ 6.0k
0
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0
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506
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RMA
Normalization probe Normalization probe
18.3 years ago Naomi Altman ★ 6.0k
0
votes
8
replies
1.9k
views
Biological replication (was RNA degradation problem)
Normalization probe affy affyPLM Normalization probe affy affyPLM
18.3 years ago Naomi Altman ★ 6.0k
0
votes
0
replies
667
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Microarray quality control question
Normalization Normalization
18.3 years ago Naomi Altman ★ 6.0k
0
votes
1
reply
515
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single channel analysis of loop designs
updated 18.4 years ago by ▴ 10 • written 18.4 years ago by ★ 6.0k
0
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0
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512
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FAQs and e-mail archive
18.4 years ago Naomi Altman ★ 6.0k
0
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1
reply
684
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Limma Coefficients using lmscFit
updated 18.4 years ago by ▴ 450 • written 18.4 years ago by ★ 6.0k
0
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1
reply
186
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limma - RG.MA
18.4 years ago Naomi Altman ★ 6.0k
0
votes
2
replies
754
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Limma and creating design matrices for complex loop designs
limma limma
updated 18.4 years ago by 50k • written 18.4 years ago by ★ 6.0k
0
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2
replies
532
views
Single Channel Analysis
updated 18.5 years ago by 50k • written 18.5 years ago by ★ 6.0k
0
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0
replies
711
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| Correlation | > 1 (limma)
18.5 years ago Naomi Altman ★ 6.0k
0
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0
replies
527
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limma and 'randomizedBlockFit' is deprecate
limma limma
18.6 years ago Naomi Altman ★ 6.0k
0
votes
4
replies
2.6k
views
hexbin in R 2.2.0 - installation problem
graph hexbin graph hexbin
updated 18.6 years ago by ▴ 320 • written 18.6 years ago by ★ 6.0k
0
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0
replies
836
views
ANCOVA in limma
limma limma
18.6 years ago Naomi Altman ★ 6.0k
0
votes
0
replies
660
views
Almost inexisting overlap of diff. expr. genes found when comparing mas5 / rma
Normalization limma Normalization limma
18.7 years ago Naomi Altman ★ 6.0k
0
votes
0
replies
631
views
Significant dye bias using limma
limma limma
18.7 years ago Naomi Altman ★ 6.0k
0
votes
2
replies
669
views
limma: positive correlation for dyeswap pairs
18.8 years ago Naomi Altman ★ 6.0k
0
votes
0
replies
658
views
Fwd: limma: positive correlation for dyeswap pairs
18.8 years ago Naomi Altman ★ 6.0k
0
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0
replies
621
views
problem read.maimage("Agilent") -limma
Annotation limma Annotation limma
18.8 years ago Naomi Altman ★ 6.0k
0
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5
replies
1.9k
views
new hexbin + adding points to hexbin plots
hexbin hexbin
updated 18.8 years ago by ▴ 430 • written 18.8 years ago by ★ 6.0k
0
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0
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551
views
Limma Users' Guide - ndups, blocks p. 25 - ignore previous messages
18.8 years ago Naomi Altman ★ 6.0k
0
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1
reply
428
views
Limma Users' Guide - ndups, blocks p. 25
18.8 years ago Naomi Altman ★ 6.0k
0
votes
0
replies
865
views
Limma analysis of focused arrays vs. whole genome arrays
Normalization limma Normalization limma
18.8 years ago Naomi Altman ★ 6.0k
0
votes
0
replies
901
views
technical reps, limma - theory
limma limma
18.8 years ago Naomi Altman ★ 6.0k
0
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0
replies
1.1k
views
hexbin - xlim, ylim
hexbin hexbin
18.8 years ago Naomi Altman ★ 6.0k
0
votes
4
replies
1.4k
views
hexbin needs colorspace - but where is colorspace?
hexbin hexbin
updated 18.8 years ago by ▴ 380 • written 18.8 years ago by ★ 6.0k
0
votes
0
replies
606
views
colorspace is found
18.8 years ago Naomi Altman ★ 6.0k
142 results • Page 2 of 3
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