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1.6k
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edgeR i get 377 significant genes where in DESeq i got 0
edgeR DESeq edgeR DESeq
updated 13.7 years ago by 53k • written 13.7 years ago by ★ 13k
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0
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831
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R course: London, Monday 18th - Friday 22nd June 2012.
13.7 years ago Guest User ★ 13k
0
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0
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1.1k
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cummeRbund package function diffData returns no rows for TSS features
RNASeq cummeRbund RNASeq cummeRbund
13.7 years ago Guest User ★ 13k
0
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1
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1.7k
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EBImage in R-Cloud
EBImage EBImage
updated 13.7 years ago by ★ 8.2k • written 13.7 years ago by ★ 13k
0
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1
reply
2.4k
views
Error by using gpr data with marray
limma marray ArrayExpress limma marray ArrayExpress
updated 13.7 years ago by ★ 13k • written 13.7 years ago by ★ 13k
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12
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2.9k
views
plotting a CA
updated 13.7 years ago by ▴ 510 • written 13.7 years ago by ★ 13k
0
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1
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581
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Question about Normalization
updated 13.7 years ago by 21k • written 13.7 years ago by ★ 13k
0
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0
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1.2k
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makeOrgPackageFromNCBI another error - reversed commands
BiocViews GO Organism ChipName biocViews BiocViews BiocViews GO Organism ChipName
13.7 years ago Guest User ★ 13k
0
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0
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489
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chi-squared
13.7 years ago Guest User ★ 13k
0
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1
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2.9k
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Answer: A: arrayQualityMetrics unable to find an inherited method for function \"platformsp
13.7 years ago Guest User ★ 13k
1
vote
2
replies
2.9k
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arrayQualityMetrics unable to find an inherited method for function \"platformspecific\", for signature \"character\"
arrayQualityMetrics arrayQualityMetrics
13.7 years ago Guest User ★ 13k
0
votes
7
replies
2.7k
views
question about biomaRt problem
biomaRt biomaRt
updated 13.7 years ago by ★ 2.0k • written 13.7 years ago by ★ 13k
0
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1
reply
1.2k
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AnnotationDbi - makeOrgPackageFromNCBI - gene_info table is not populated
GO GO
updated 13.7 years ago by ★ 7.2k • written 13.7 years ago by ★ 13k
0
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10
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2.0k
views
re incomplete analysis in Deseq
DESeq DESeq
updated 13.7 years ago by ★ 13k • written 13.7 years ago by ★ 13k
0
votes
1
reply
810
views
How to include external applications in package vignette code?
updated 13.7 years ago by 21k • written 13.7 years ago by ★ 13k
0
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1
reply
1.1k
views
Aroma query (Follow up to thread: \"Reading 5000 celfiles with ReadAffy\" )
cdf cdf
updated 13.8 years ago by ★ 2.4k • written 13.8 years ago by ★ 13k
0
votes
6
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1.4k
views
Use probesets with highest baseline expression for differntial gene expression in LIMMA
limma limma
updated 13.8 years ago by 68k • written 13.8 years ago by ★ 13k
0
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10
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2.3k
views
Reading 5000 celfiles with ReadAffy
affy affy
updated 13.8 years ago by ▴ 110 • written 13.8 years ago by ★ 13k
0
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1
reply
1.0k
views
Removing phenoData and assayData
updated 13.8 years ago by 21k • written 13.8 years ago by ★ 13k
0
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4
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2.1k
views
[lumi] methylumIDAT : probleme to read idat files
updated 13.8 years ago by ★ 4.2k • written 13.8 years ago by ★ 13k
0
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0
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1.7k
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IS PROGRAMMER/ANALYST I / 40 HOUR / DAY / BWH - CHANNING LABORATORY
Epigenetics Annotation Network Epigenetics Annotation Network
13.8 years ago Guest User ★ 13k
0
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0
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1.3k
views
SCIENTIFIC DATA CURATOR / 40 HOUR / DAY / BWH - CHANNING LABORATORY
Genetics Genetics
13.8 years ago Guest User ★ 13k
0
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1
reply
913
views
Affymetrix internal control up-regulated, is anything wrong?
updated 13.8 years ago by 68k • written 13.8 years ago by ★ 13k
0
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0
replies
604
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Relationship between Fold Change and SLR
13.8 years ago Guest User ★ 13k
0
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0
replies
543
views
Inquiry package for Illumina BeadChip HumanOmni
Microarray Microarray
13.8 years ago Guest User ★ 13k
0
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0
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935
views
iSeq package\'s peakreg fails
iSeq iSeq
13.8 years ago Guest User ★ 13k
0
votes
1
reply
1.3k
views
Creating a customized cut flow with the affy/limma packages
GO hgu133plus2 limma ASSIGN GO hgu133plus2 limma ASSIGN
updated 13.8 years ago by 68k • written 13.8 years ago by ★ 13k
0
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3
replies
1.3k
views
Inconsistent coefficient values
updated 13.8 years ago by 6.7k • written 13.8 years ago by ★ 13k
0
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1
reply
1.3k
views
How to install topGO on R version 2.14.0
topGO topGO
updated 13.8 years ago by 21k • written 13.8 years ago by ★ 13k
0
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1
reply
1.7k
views
SOM clustering
Microarray Clustering Microarray Clustering
updated 13.8 years ago by ▴ 300 • written 13.8 years ago by ★ 13k
0
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0
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660
views
How do I define my design in FDR-AME package
13.8 years ago Guest User ★ 13k
0
votes
3
replies
2.1k
views
Problem while installing \"org.At.tair.db\" and \"ath1121501.db\"
updated 13.8 years ago by 21k • written 13.8 years ago by ★ 13k
0
votes
1
reply
925
views
Error reading cel files using Readaffy() or getGEO()
updated 13.8 years ago by 68k • written 13.8 years ago by ★ 13k
0
votes
2
replies
992
views
Cross-comparison of independent intensities from different experiments (genepix) (sorry I don\'t know how to describe the problem better)
Normalization GO Normalization GO
updated 13.8 years ago by 68k • written 13.8 years ago by ★ 13k
0
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0
replies
946
views
Can SAM be combined with the bootstrap with replacement method?
Microarray Microarray
13.8 years ago Guest User ★ 13k
0
votes
0
replies
622
views
CardioNet PhD Student in Madrid, Spain
13.8 years ago Guest User ★ 13k
0
votes
12
replies
3.0k
views
affy : ReadAffy() fails on HuGene-1_1-st-v1 chips
updated 13.8 years ago by ★ 1.2k • written 13.9 years ago by ★ 13k
0
votes
4
replies
3.8k
views
Rgraphviz: fail to plot
Rgraphviz Rgraphviz
updated 13.8 years ago by 25k • written 13.8 years ago by ★ 13k
0
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1
reply
1.1k
views
rtrackplayer UCSC multiz maf download
Alignment Alignment
updated 13.8 years ago by ★ 11k • written 13.8 years ago by ★ 13k
0
votes
1
reply
1.1k
views
URGENT Help required: Getting this error with GAGE analysis
updated 13.8 years ago by 25k • written 13.8 years ago by ★ 13k
1
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2
replies
7.1k
views
how to get a list of the genes in each module in WGCNA
updated 13.9 years ago by ▴ 340 • written 13.9 years ago by ★ 13k
0
votes
5
replies
1.5k
views
Bioconductor AMI NOT FOUND
updated 13.9 years ago by ★ 8.2k • written 13.9 years ago by ★ 13k
0
votes
1
reply
1.4k
views
rho statistics for dinucleotide abundance from a sequence file
updated 13.9 years ago by ★ 13k • written 13.9 years ago by ★ 13k
0
votes
3
replies
1.1k
views
ChiPpeakAnno: findOverlappingPeaks: running time
GO ChIPpeakAnno GO ChIPpeakAnno
updated 13.9 years ago by ★ 4.3k • written 13.9 years ago by ★ 13k
0
votes
1
reply
915
views
How remove controls probes - Affymetrix Gene
GO probe oligo GO probe oligo
updated 13.9 years ago by 68k • written 13.9 years ago by ★ 13k
0
votes
6
replies
1.5k
views
rtracklayer laying a track
rtracklayer rtracklayer
updated 13.9 years ago by ★ 11k • written 13.9 years ago by ★ 13k
0
votes
3
replies
1.6k
views
Caught segfault when running MEDIPS package
Sequencing MEDIPS Sequencing MEDIPS
updated 13.9 years ago by ▴ 40 • written 13.9 years ago by ★ 13k
0
votes
0
replies
632
views
Affymetrix Gene array probe coordinates, mogene10stv1probe
probe biomaRt probe biomaRt
13.9 years ago Guest User ★ 13k
0
votes
3
replies
2.9k
views
installation of Rsamtools
13.9 years ago Guest User ★ 13k
0
votes
1
reply
2.9k
views
Answer: A: installation of Rsamtools
13.9 years ago Guest User ★ 13k
1,206 results • Page 23 of 25
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