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0
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7
replies
3.2k
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fourCseq - error getZscores
fourcseq
updated 9.9 years ago by ▴ 150 • written 10.1 years ago by ▴ 140
5
votes
6
replies
11k
views
Merge multiple genomic intervals if overlapping more than xx percents
genomicranges
written 10.6 years ago by ▴ 140
0
votes
0
replies
7.3k
views
Comment: C: ChIPseq-style peak calling for paired-end sequencing?
10.6 years ago samuel collombet ▴ 140
8
votes
9
replies
7.3k
views
ChIPseq-style peak calling for paired-end sequencing?
Chipseq DNAseq ATAC bayespeak narrowpeaks
updated 10.6 years ago by 53k • written 10.6 years ago by ▴ 140
0
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0
replies
7.3k
views
Comment: C: ChIPseq-style peak calling for paired-end sequencing?
10.6 years ago samuel collombet ▴ 140
0
votes
0
replies
11k
views
Comment: C: Merge multiple genomic intervals if overlapping more than xx percents
10.6 years ago samuel collombet ▴ 140
0
votes
1
reply
11k
views
Comment: C: Merge multiple genomic intervals if overlapping more than xx percents
10.6 years ago samuel collombet ▴ 140
1
vote
1
reply
7.3k
views
Comment: C: ChIPseq-style peak calling for paired-end sequencing?
10.6 years ago samuel collombet ▴ 140
0
votes
1
reply
7.3k
views
Comment: C: ChIPseq-style peak calling for paired-end sequencing?
10.6 years ago samuel collombet ▴ 140
0
votes
0
replies
22k
views
Comment: C: featureCounts - paired-end data
10.6 years ago samuel collombet ▴ 140
0
votes
0
replies
22k
views
Comment: C: featureCounts - paired-end data
10.6 years ago samuel collombet ▴ 140
0
votes
1
reply
22k
views
Comment: C: featureCounts - paired-end data
10.6 years ago samuel collombet ▴ 140
0
votes
1
reply
22k
views
Comment: C: featureCounts - paired-end data
10.6 years ago samuel collombet ▴ 140
0
votes
1
reply
22k
views
Comment: C: featureCounts - paired-end data
10.6 years ago samuel collombet ▴ 140
3
votes
16
replies
22k
views
featureCounts - paired-end data
featurecounts rsubread
updated 2.5 years ago by • 0 • written 10.6 years ago by ▴ 140
2
votes
4
replies
1.9k
views
fourCseq - zscore distribution - trans interractions
fourCseq
updated 10.6 years ago by 25k • written 11.2 years ago by ▴ 140
0
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0
replies
6.0k
views
Comment: C: ClusterProfiler: enrichGO / compareCluster and Pvalue threeshold
10.7 years ago samuel collombet ▴ 140
1
vote
4
replies
6.0k
views
ClusterProfiler: enrichGO / compareCluster and Pvalue threeshold
clusterprofiler
updated 10.7 years ago by ★ 1.2k • written 10.7 years ago by ▴ 140
0
votes
0
replies
6.0k
views
Answer: A: ClusterProfiler: enrichGO / compareCluster and Pvalue threeshold
10.7 years ago samuel collombet ▴ 140
4
votes
3
replies
4.7k
views
topGO: significant genes in GO enriched categories
topGO
updated 10.7 years ago by ▴ 30 • written 10.8 years ago by ▴ 140
0
votes
0
replies
2.7k
views
Comment: C: ReactomePA : error with gsePathway
10.7 years ago samuel collombet ▴ 140
0
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0
replies
2.7k
views
Comment: C: ReactomePA : error with gsePathway
10.7 years ago samuel collombet ▴ 140
2
votes
4
replies
2.7k
views
ReactomePA : error with gsePathway
ReactomePA gsePathway
updated 10.7 years ago by ★ 1.2k • written 10.7 years ago by ▴ 140
1
vote
1
reply
2.3k
views
topGO - genesInTerm returns genes not in the annotation
topGO
10.8 years ago samuel collombet ▴ 140
0
votes
0
replies
2.3k
views
Comment: C: topGO - genesInTerm returns genes not in the annotation
10.8 years ago samuel collombet ▴ 140
0
votes
0
replies
2.5k
views
Answer: A: how to perform pre ranked GSEA in R?
10.8 years ago samuel collombet ▴ 140
2
votes
1
reply
2.1k
views
DESeq2 - test fold change below a threeshold
DESeq2
updated 10.8 years ago by 43k • written 10.8 years ago by ▴ 140
0
votes
1
reply
1.7k
views
Comment: C: Problem with scanBam
10.8 years ago samuel collombet ▴ 140
0
votes
0
replies
2.7k
views
Comment: C: FourCseq - error ountFragmentOverlaps()
10.8 years ago samuel collombet ▴ 140
0
votes
1
reply
2.7k
views
Comment: C: FourCseq - error ountFragmentOverlaps()
10.8 years ago samuel collombet ▴ 140
0
votes
1
reply
2.7k
views
Comment: C: FourCseq - error ountFragmentOverlaps()
10.8 years ago samuel collombet ▴ 140
0
votes
1
reply
2.7k
views
Comment: C: FourCseq - error ountFragmentOverlaps()
10.8 years ago samuel collombet ▴ 140
0
votes
11
replies
2.7k
views
FourCseq - error ountFragmentOverlaps()
fourcseq
10.8 years ago samuel collombet ▴ 140
0
votes
1
reply
2.7k
views
Answer: A: FourCseq - error ountFragmentOverlaps()
10.8 years ago samuel collombet ▴ 140
0
votes
0
replies
6.1k
views
Answer: A: limma - F-test for many condition
10.8 years ago samuel collombet ▴ 140
8
votes
4
replies
6.1k
views
limma - F-test for many condition
limma F-test
10.8 years ago samuel collombet ▴ 140
3
votes
3
replies
5.2k
views
Rsubreads - featureCount - gtf - error
rsubread featurecounts
10.9 years ago • updated 10.8 years ago samuel collombet ▴ 140
0
votes
0
replies
5.2k
views
Answer: A: Rsubreads - featureCount - gtf - error
10.8 years ago samuel collombet ▴ 140
0
votes
4
replies
1.8k
views
fourCseq - getDifferences and normnalisation
fourcseq
updated 11.1 years ago by ▴ 150 • written 11.1 years ago by ▴ 140
0
votes
0
replies
1.8k
views
Comment: C: fourCseq - getDifferences and normnalisation
11.1 years ago samuel collombet ▴ 140
0
votes
1
reply
11k
views
Comment: C: DESeq2 - paired sample, interaction and fold change
11.5 years ago samuel collombet ▴ 140
2
votes
3
replies
11k
views
DESeq2 - paired sample, interaction and fold change
DESeq2 DESeq2
updated 11.5 years ago by 43k • written 11.5 years ago by ▴ 140
0
votes
2
replies
2.2k
views
DESeq2 - precisions about interaction and fold change calculation
DESeq2 DESeq2
updated 11.6 years ago by 43k • written 11.6 years ago by ▴ 140
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