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Showing :
questions
2
votes
2
replies
766
views
featureCounts: No effect of setting -d and -D?
subread
featureCounts
18 months ago
dario.beraldi
• 0
0
votes
4
replies
1.1k
views
GO data for fgsea: should ensembl data be augmented to contain parent terms?
biomaRt
GO
ensembldb
fgsea
19 months ago
dario.beraldi
• 0
3
votes
4
replies
1.5k
views
Large difference between naive log2 and rlog transformation of count data
DESeq2
Normalization
rlog
updated 2.1 years ago by
Michael Love
41k • written 2.1 years ago by
dario.beraldi
• 0
1
vote
1
reply
1.2k
views
Make featureCounts ignore soft clip and insertions when for calculating read overlap
subread
featureCounts
updated 2.7 years ago by
Wei Shi
★ 3.6k • written 2.7 years ago by
dario.beraldi
• 0
0
votes
1
reply
850
views
topGo GenTable returns result column as character
GenTable
topGO
updated 3.2 years ago by
James W. MacDonald
65k • written 3.2 years ago by
dario.beraldi
• 0
4
votes
7
replies
1.1k
views
Genes upregulated in one condition vs each of the other conditions
edger
design
updated 3.8 years ago by
Gordon Smyth
50k • written 3.8 years ago by
dario.beraldi
• 0
1
vote
5
replies
1.5k
views
bug in "dispersion" argument in edgeR - rpkmByGroup
edger
rpkm
updated 4.9 years ago by
rosehahn8583
• 0 • written 4.9 years ago by
dario.beraldi
• 0
0
votes
0
replies
867
views
Shearwater missing variant
deepsnv
shearwater
variant
6.4 years ago
dario.beraldi
• 0
2
votes
2
replies
1.9k
views
SRAdb: could not find function "sqliteTableFields"
sradb
sqlite
updated 9.5 years ago by
Sean Davis
21k • written 9.5 years ago by
dario.beraldi
• 0
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