Biostar Subread

Showing : subread • reset

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292

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counts subread RNASeq featurecounts

10 weeks ago Beth_b ▴ 20

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197

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subread featureCounts

updated 5 months ago by Wei Shi ★ 3.3k • written 5 months ago by dario.beraldi • 0

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720

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subread featureCounts

updated 6 months ago by Wei Shi ★ 3.3k • written 6 months ago by s.muroy ▴ 10

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449

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featureCounts Rsubread subread CellBiology

updated 10 months ago by Yang Liao ▴ 290 • written 10 months ago by Jason • 0

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470

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SubRead Align Subjunc

updated 18 months ago by James W. MacDonald 58k • written 18 months ago by abano • 0

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691

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subread read mapping unmapped reads

updated 2.4 years ago by Wei Shi ★ 3.3k • written 2.4 years ago by Patrick • 0

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382

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rna-seq featureCounts SubRead

updated 2.5 years ago by Wei Shi ★ 3.3k • written 2.5 years ago by hafiz.talhamalik • 0

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572

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subread featureCounts gtf/gff/gff3

updated 2.5 years ago by Gordon Smyth 44k • written 2.5 years ago by algenubi81 • 0

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541

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subread Rsubread

updated 2.8 years ago by Gordon Smyth 44k • written 2.8 years ago by Jonathan Griffiths ▴ 30

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1.2k

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subread featurecounts atac

updated 2.8 years ago by Wei Shi ★ 3.3k • written 2.8 years ago by aurel.nagy ▴ 10

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307

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subread solid-seq data colorspace rna-seq

updated 2.8 years ago by Yang Liao ▴ 290 • written 2.8 years ago by gokberk • 0

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831

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subread featureCounts

updated 3.0 years ago by Gordon Smyth 44k • written 3.0 years ago by leo_CD • 0

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670

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subread

3.0 years ago Diana ▴ 10

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643

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featurecounts subread

updated 3.4 years ago by Wei Shi ★ 3.3k • written 3.4 years ago by Leon • 0

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605

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featurecounts rnaseq subread

updated 3.4 years ago by Gordon Smyth 44k • written 3.4 years ago by rogangrant • 0

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1.8k

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subread featurecounts dexseq rnaseq

updated 3.5 years ago by Gordon Smyth 44k • written 3.5 years ago by jennyl.smith12 • 0

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1.5k

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subread featurecounts

updated 4.7 years ago by Wei Shi ★ 3.3k • written 4.7 years ago by jma1991 ▴ 60

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853

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subread Rsubread

updated 6.0 years ago by Wei Shi ★ 3.3k • written 6.0 years ago by Vivek.b ▴ 100

18 results • Page 1 of 1

Recent ...

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Comment: DiffBind dba.count Error in if (sum(tokeep) < length(tokeep)) by tjhwangxiong • 0

``` https://drive.google.com/drive/folders/1787thVatZpt_KFrfXY-aXV1m0FRm8Mhm?usp=sharing ``` Thanks for your reply. I have uploaded the fil…

Comment: Trying to follow a gene set analyisis in R by Michael Love 35k

No I can’t help with exercises. Just to be clear I’m not affiliated with Harvard and have no supported effort in relation to the edx classe…

Answer: Problems to find the pvalues via rowttests by Gordon Smyth 44k

Ordinary t-tests aren't recommended for genomic analyses because they have poor power and higher false discovery rates. Using the limma p…

Answer: How to insert a qvalues column in a dataframe with pvalues in R by Gordon Smyth 44k

Here and in a previous post, it seems you're not using recommended Bioconductor workflows for Affymetrix microarrays. If you used a standar…

Comment: Trying to follow a gene set analyisis in R by leonardorosas2001 • 0

Thank you. I hope I can still let you know if I have issues with your exercises. They are very challenging but useful! :)

Votes

Answer: Problems to find the pvalues via rowttests

A: How to use subSeq with DNAStringSet and information of GroupedIRanges?

Annotating GRanges with TxDb gene models using plyranges

plyranges select() when a metadata column is shared with core variable

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