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nhaus ▴ 70
1 year, 3 months ago
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Get MANE transcripts from TxDb.Hsapiens.UCSC.hg38.knownGene
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Sara • 0
1 year, 3 months ago
Belgium
removing the batch effect for vst counts and defining the batches in removeBatchEffect function
Eva ▴ 10
1 year, 3 months ago
Spain
lfcShrink() and batch effects in DESeq2
Jonathan ▴ 10
1 year, 4 months ago
United States
Adding a group of samples reduces DEGs in other groups
Jonathan ▴ 10
1 year, 4 months ago
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Limma multi-group, nested analysis with aggregation
Chris ▴ 20
1 year, 4 months ago
United States
Help with error DiffBind
Sam ▴ 10
1 year, 4 months ago
Jerusalem
DiffBind does not use DESeq2 MLE estimation of fold change
rae.alshammari ▴ 10
1 year, 4 months ago
United States
Warning messages in detecting P-values
chiwut.wong • 0
1 year, 4 months ago
United States
Is it proper to compare two WGCNA matrixes if they were raised to different power (soft threshold)?
Luca • 0
1 year, 4 months ago
Italy
RNA seq differential expression analysis for large sample size
mohammedtoufiq91 ▴ 10
1 year, 4 months ago
United States
Question about RNAseq analysis in EdgeR to identify common and donor specific differentially expressed genes
Chris ▴ 20
1 year, 4 months ago
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Reading data into chromVAR
smac_head • 0
1 year, 4 months ago
United Kingdom
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maltethodberg ▴ 180
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1 year, 5 months ago
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abhisek001 • 0
1 year, 5 months ago
India
Query regarding to create custom organism database with AnnotationForge package (AnnotationForge::makeOrgPackageFromNCBI)
Theo ▴ 10
1 year, 5 months ago
Germany
ranking the DeSeq2 results using t-values?
Anna ▴ 20
1 year, 5 months ago
Germany
decideTests vs topTable results
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1 year, 5 months ago
European Union
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1 year, 5 months ago
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DiffBind:all samples have 0 counts for all genes.
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1 year, 5 months ago
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P-value histogram of testLinearModel is not uniform
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1 year, 6 months ago
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BioC2023 abstract submission is now open!
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1 year, 6 months ago
Cambridge, MA
SummarizedExperiment is now warning on attach about `read_block` namespace conflict
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1 year, 6 months ago
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1 year, 6 months ago
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1 year, 6 months ago
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Sabiha ▴ 20
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1 year, 6 months ago
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1 year, 6 months ago
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1 year, 6 months ago
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1 year, 6 months ago
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1 year, 6 months ago
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1 year, 6 months ago
Palo Alto, CA, USA
about baseMean in DEseq2
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1 year, 6 months ago
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1 year, 6 months ago
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Join the Technical Advisory Board
ATpoint ★ 4.6k
1 year, 6 months ago
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1 year, 6 months ago
Cambridge, MA
DESeq2 1.40.0 binary install issue on macOS x86 (Bioconductor 3.17)
FedeXandeR • 0
1 year, 6 months ago
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Why is RNA-Seq library size not constant among samples?
Max Bone • 0
1 year, 7 months ago
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Alexandros • 0
1 year, 7 months ago
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MEME ▴ 10
1 year, 7 months ago
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DESeq2 1.40.0 binary install issue on Mac M1 (Bioconductor 3.17)
Weiqian ▴ 10
1 year, 7 months ago
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Marcus • 0
1 year, 7 months ago
Germany
calculate distance to a certain sequence in one gene
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1 year, 7 months ago
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1 year, 7 months ago
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1 year, 7 months ago
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Positive and negative value fold value in ATAC seq using DiffBind
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