Dear everyone,
currently I am writing my master thesis which deals with the expression of genes during microsclerotial germination of the phytopathogenic fungus Verticillium longisporum. My next task is to conduct a bioinformatical analysis, the first step of which consists of creation of an OrgDB database. When I try to implement my supervisor's guidelines, I am constantly facing error messages which I do not understand and when I search the Internet, I do not understand the advice either (possibly due to a lack of basic knowledge). Therefore, I would be very pleased to find someone to explain precisely how to create an OrgDB database and how to conduct a basic bioinformatical analysis of gene expression. I would strongly appreciate your support because I absolutely do not know how to solve this problem. Thank you very much!
Unfortunately, you won't be able to get training from anybody on this support site. Instead we can only help with individual issues. For example, you say you tried to load
AnnotationForge
but it did not work. Nobody can help you if that is all you tell us. Instead, you need to provide the output that R provided, as well as the output from runningsessionInfo()
. Without that information it's impossible to help. You should read the FAQ, particularly all the parts about how to make a good post.OK, do you know where to find someone to get training from?