Bioconductor AI

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NGS AI Bioconductor

updated 15 months ago by Tyler Sagendorf ▴ 10 • written 15 months ago by Gerhard Thallinger ▴ 180

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2.0 years ago Wolfgang Huber ★ 13k

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Biology AI Machinelearning Precisionmedicine Norway

3.7 years ago delete • 0

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ComputationalBiomedicine AI UniversityHelsinki PhD Bioinformatics

3.9 years ago Alyce • 0

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CancerMutationAnalysis AI variationinterpreation

5.0 years ago a1mauno • 0

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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