Showing : NGS • reset
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107
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Rsamtools and data.table OR advice of packages
data.table Rsamtools NGS
4 months ago sara • 0
1
vote
3
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576
views
copy number variation analysis (CNV)
copynumber plot visualization NGS gene
updated 17 months ago by ▴ 150 • written 19 months ago by • 0
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0
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425
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Job: Two bioinformatics positions at Boston Children's Hospital
NGS Job
updated 18 months ago by 36k • written 19 months ago by • 0
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0
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1.4k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
3.9 years ago • updated 18 months ago Luo Weijun ★ 1.5k
0
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0
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863
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
3.3 years ago • updated 2.5 years ago Luo Weijun ★ 1.5k
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434
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Job: Research Associate in Genomics Pipelines @ UEA, Norwich, UK
pipelines NGS Research associate Docker Job
2.8 years ago Daniel Brewer ▴ 90
4
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4
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1.3k
views
Average read counts and batch-effect correction in edgeR
edgeR batch-effect RNA-seq read counts ngs
updated 3.4 years ago by ★ 27k • written 3.4 years ago by ▴ 20
2
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1
reply
888
views
rtracklayer BigBed format
ngs rtracklayer bigbed
updated 3.4 years ago by 11k • written 3.4 years ago by ▴ 80
0
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0
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518
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Job: Bioinformatician ('CHBIO15) (m/f)
bioinformatician job Linux NGS Job
3.5 years ago l.brown ▴ 10
0
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0
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483
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Job: Open position for a bioinformatician in Copenhagen
R NGS Job
3.8 years ago gretchen.repasky ▴ 20
0
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0
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557
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Sequencing database tool in R: tracking Sanger and NGS of large-scale directed evolution projects
rmysql fastq seqinr ngs sangerseqr
4.0 years ago JoeMG • 0
0
votes
1
reply
588
views
counting reads with muliple hits with SummarizeOverlaps
R seq ngs summarizeoverlaps
updated 4.1 years ago by ★ 6.7k • written 4.1 years ago by • 0
0
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0
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669
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Job: EXTENDED: Bioinformatics Specialist at the University of Illinois
microbiome epigenomics bioinformatics analyst NGS Job
4.2 years ago Jenny Drnevich ★ 2.0k
0
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0
replies
601
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Job: Bioinformatics Engineer / Data Analyst
python bio ngs linux Job
4.2 years ago EMBL Recruitment • 0
0
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0
replies
735
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Job: Senior Bioinformatician, Children's Cancer Research Institute Vienna, Austria
postdoc rnaseq NGS WGS bioinformatician job Job
4.3 years ago da.de ▴ 20
0
votes
1
reply
842
views
Plotting bigwig coverage over chromosomal coordinates with wiggleplotr
wiggleplotr bigwig coverage ngs
updated 4.6 years ago by ▴ 30 • written 4.6 years ago by • 0
1
vote
0
replies
760
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Job: Computational Biologist position in CRUK Manchester Institute, UK
ngs prostate cancer genomics computational biology bioinformatician job Job
4.9 years ago • updated 4.8 years ago huisun.leong ▴ 10
0
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6
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7.1k
views
converting fasta file into bam file
ngs
4.9 years ago nosheenfaiz09 • 0
1
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4
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1.1k
views
TarSeqQC TargetExperiment() Error- failed to stop SOCKcluster cluster-error writing to connection
TarSeqQC R ngs biocparallel
updated 4.9 years ago by 25k • written 4.9 years ago by ▴ 10
0
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0
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799
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Job: Hunting for Human Infectious Agents in Cancer using data from Genomics England's 100,000 genome project : PhD Studentship @ UEA, Norwich
phd cancer pathogens NGS Job
5.0 years ago Daniel Brewer ▴ 90
1
vote
11
replies
1.5k
views
rsubread versus BWA ( Burrows-Wheeler Alignmener) for whole genome alignment
rsubread BWA NGS
updated 5.7 years ago by ★ 3.4k • written 5.7 years ago by ▴ 10
0
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0
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829
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Job: Bioinformatician / Statistician Position - Ref.: 2016/45 - in Badalona, Barcelona, Spain
ngs microarray bioinformatician job Job
5.9 years ago Lauro Sumoy ▴ 10
1
vote
0
replies
930
views
Job: Computational Biologist position in CRUK Manchester Institute, UK
bioinformatician job ngs leukemia cancer Job
6.0 years ago Hui Sun Leong ▴ 10
0
votes
0
replies
936
views
Job: 2015 Movember Foundation PhD Studentship in Bioinformatics @ UEA, Norwich, UK
Phd NGS cancer prostate Job
6.2 years ago Daniel Brewer ▴ 90
0
votes
0
replies
1.1k
views
Job: Computational Biologist (Genome Statistical Analyst) position in CRUK Manchester Institute, UK
job bioinformatics ngs genomics statistics Job
6.2 years ago Hui Sun Leong ▴ 10
0
votes
0
replies
1.5k
views
Job: Bioinformatics Data Analyst in Cancer Immunology
job NGS Data Analyst Cancer Job
6.3 years ago Jaritz,Markus ▴ 20
1
vote
0
replies
1.2k
views
Job: Job Opening: Computational Biologists in Cambridge, MA and NYC
ngs computational biology R genomics bioinformatics Job
6.6 years ago mmartin ▴ 20
0
votes
0
replies
1.0k
views
Job: Senior Research Associate in Bioinformatics, Norwich Medical School, UEA, UK
bioinformatician job biofilm NGS Job
6.8 years ago Daniel Brewer ▴ 90
0
votes
5
replies
3.1k
views
bioconductor package for BWA-MEM ?
bwa ngs
updated 6.8 years ago by 45k • written 6.8 years ago by ▴ 50
1
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0
replies
1.7k
views
Job: Postdoctoral/Senior Scientist Position in New York City- Mount Sinai School of Medicine
genomics data integration job ngs computational biology Job
7.0 years ago supindab ▴ 10
0
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0
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1.3k
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Job: Bioinformatician / NGS Data Analyst (Stark Group, Vienna, Austria)
bioinformatician job ngs genomics Job
7.1 years ago stark • 0
0
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0
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1.1k
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Job: Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer translation ngs genomics Job
7.2 years ago jhjohnsn • 0
7
votes
4
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5.1k
views
how can I tell if a RNAseq BAM file is paired end or single end ?
NGS BAm
updated 7.4 years ago by ▴ 380 • written 7.4 years ago by ▴ 50
1
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0
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982
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News: Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
workshop ngs training News
7.6 years ago Thomas Girke ★ 1.7k
34 results • Page 1 of 1
Recent ...
Replies
Comment: R: problem with running time-series analysis software: Mfuzz by Kevin Blighe 3.5k
Cross-posted: https://www.biostars.org/p/9524023/
Comment: ROC plot for OPLS-DA by Eddie • 0
Hi, That was helpful. Thank you. How to do the same for the testing data?
Comment: ChIP-seq peak annotation to gene in ChIPseeker by Gyan Prakash Mishra • 0
After going through the package, I think all the peaks are annotated to genes irrespective of distance to TSS. There is also another functi…
Comment: lpsymphony compilation trouble by Cankun • 0
It's 2022 and it still works for lpsymphony_1.24.0
Comment: UniprotKB AC/ID to Entrez ID Conversion by James W. MacDonald 59k
I fixed this when Bioc 3.13 was the release version, so it should work in 3.14 and the current release. ``` > up <- UniProt.ws() > input …
Votes
A: lpsymphony compilation trouble
Answer: Robust Multi-array Average could get negative value or not?
Answer: Robust Multi-array Average could get negative value or not?
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Awards • All
Scholar to James W. MacDonald 59k
Scholar to Guido Hooiveld ★ 3.2k
Scholar to Kevin Blighe 3.5k
Scholar to SamGG ▴ 270
Prophet to johnmcma ▴ 10
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