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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
updated 8 weeks ago by • 0 • written 20 months ago by ▴ 90
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News: Reminder: BioC2023 in-person registration closes 19th July!
Bioconductor BioC2023 Conference
15 months ago Maria Doyle ▴ 90
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News: May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor Awards Bioc2023 Recognition
16 months ago shepherl 4.0k
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor Community BioC2023
16 months ago Maria Doyle ▴ 90
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News: Last Week to Nominate for Bioc2023 Awards!
Bioconductor Bioc2023 Recognition Awards
16 months ago shepherl 4.0k
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News: Junior Developer or New Package Developer Award
Bioconductor Recognition Bioc2023 Awards
17 months ago • updated 16 months ago shepherl 4.0k
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News: Bioconductor Community Engagement, Outreach, and Diversity Award
Awards Bioconductor Bioc2023 Recognition
17 months ago • updated 16 months ago shepherl 4.0k
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News: Bioconductor Long-term Contribution Award
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17 months ago • updated 16 months ago shepherl 4.0k
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News: Nominations for Bioconductor 2023 Awards!
Awards Bioconductor Bioc2023 Recognition
18 months ago • updated 16 months ago shepherl 4.0k
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News: Seeking members for BioC2023 organizing committee
BioC2023 Bioconductor community
20 months ago Maria Doyle ▴ 90
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News: Save the Date Bioc2023!
Bioc2023 Conference Bioconductor
23 months ago shepherl 4.0k
11 results • Page 1 of 1
Recent ...
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Answer: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k
You have a `data.frame` with 9 columns and are specifying a minimum of 20 observations per gene. Since you don't have 20 observations for a…
Comment: Annotation for EPICv2 by nurkenber • 0
Got it Thank you
Comment: Annotation for EPICv2 by James W. MacDonald 67k
I don't think I can help with your questions. Like I said, the annotation data are based on the manifest files that Illumina provides, and …
Comment: Annotation for EPICv2 by nurkenber • 0
Thank you for your reply. I welcome any help I can get) I checked the first two are based on the same file, [Infinium MethylationEPIC v2.…
Answer: Mostly increased counts in differentially accessible peaks using DESeq2 by Michael Love 42k
The difference between tracks and DESeq2 (or any count method in Bioc) is that tracks use simple scaling that is not robust to large shifts…
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Comment: Annotation for EPICv2
Answer: Highly DE genes but small count difference within conditions
Answer: Highly DE genes but small count difference within conditions
Answer: Annotation for EPICv2
C: Vertical line at A=0, nothing else, on MA plot
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Popular Question to Eva ▴ 10
Scholar to Michael Love 42k
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Popular Question to Gordon Smyth 51k
Scholar to ATpoint ★ 4.5k
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