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ChemmineR
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Comparing compounds in CheminneR
Cheminformatics
ChemmineR
ChemmineDrugs
9 months ago
Sean
• 0
0
votes
1
reply
831
views
ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf
ChemmineOB
Cheminformatics
ChemmineR
2.8 years ago
adelenelai
• 0
0
votes
0
replies
1.4k
views
How to combined multiple *.mol files into a single *.sdf file using ChemmineR?
ChemmineR
Chemmin
ChemmineOB
3.0 years ago
sukissqz
• 0
3
votes
4
replies
1.3k
views
Error in ChemmineR function propOB() and ChemmineOB prop_OB()
ChemmineR
ChemmineOB
updated 3.3 years ago by
Thomas Girke
★ 1.7k • written 3.4 years ago by
teresadijor
• 0
2
votes
6
replies
1.1k
views
How to remove HCL mols in Chemminer
ChemmineR
Chemistry
updated 5.1 years ago by
khoran
• 0 • written 5.2 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
922
views
Bioactivity assay DBs for cheminfo packages
bioassayR
ChemmineR
PubChem
updated 5.2 years ago by
Thomas Girke
★ 1.7k • written 5.2 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
912
views
Where can I locate the bioassayR database?
bioassayr
chemmineR
cheminformatics
5.2 years ago
Anthony Nash
▴ 20
1
vote
4
replies
2.1k
views
How do I convert kegg info on drug to a format allowing me to calculate similarities?
keggrest
chemminer
fmcsr
graph
written 6.2 years ago by
Joris.Meys
• 0
0
votes
0
replies
841
views
Downloading 3D compounds from Pubchem in ChemmineR
chemminer
6.6 years ago
jubilantsundar
• 0
1
vote
2
replies
1.4k
views
drawing chemical from smile 2D/3D
chemminer
updated 6.9 years ago by
Thomas Girke
★ 1.7k • written 6.9 years ago by
Stane
▴ 40
0
votes
0
replies
971
views
Tversky' alpha and beta should not be int, should they?
ChemmineR
7.2 years ago
stephan.struckmann
• 0
0
votes
2
replies
1.4k
views
output of propOB function ChemmineR
ChemmineR
ChemmineOB
ChemmineTools
Drug
7.2 years ago
elisa.micarelli
▴ 10
0
votes
1
reply
2.1k
views
ChemmineR package - fpSim and cmp.similarity - Tanimoto kernels
ChemmineR
updated 8.1 years ago by
Thomas Girke
★ 1.7k • written 8.1 years ago by
ረ
• 0
0
votes
0
replies
1.1k
views
MCS & ChemineR
Network
Clustering
PROcess
ChemmineR
Network
Clustering
PROcess
ChemmineR
11.2 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
1.2k
views
ChemmineR Help
Clustering
ChemmineR
Clustering
ChemmineR
11.5 years ago
Thomas Girke
★ 1.7k
15 results • Page
1 of 1
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Replies
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
makala
• 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
Erik Wright
▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
Matthew Thornton
▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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