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chemminer
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Comparing compounds in CheminneR
Cheminformatics
ChemmineR
ChemmineDrugs
8 months ago
Sean
• 0
0
votes
1
reply
815
views
ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf
ChemmineOB
Cheminformatics
ChemmineR
2.7 years ago
adelenelai
• 0
0
votes
0
replies
1.3k
views
How to combined multiple *.mol files into a single *.sdf file using ChemmineR?
ChemmineR
Chemmin
ChemmineOB
2.9 years ago
sukissqz
• 0
3
votes
4
replies
1.3k
views
Error in ChemmineR function propOB() and ChemmineOB prop_OB()
ChemmineR
ChemmineOB
updated 3.2 years ago by
Thomas Girke
★ 1.7k • written 3.4 years ago by
teresadijor
• 0
2
votes
6
replies
1.1k
views
How to remove HCL mols in Chemminer
ChemmineR
Chemistry
updated 5.1 years ago by
khoran
• 0 • written 5.2 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
905
views
Bioactivity assay DBs for cheminfo packages
bioassayR
ChemmineR
PubChem
updated 5.1 years ago by
Thomas Girke
★ 1.7k • written 5.1 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
898
views
Where can I locate the bioassayR database?
bioassayr
chemmineR
cheminformatics
5.2 years ago • updated 5.1 years ago
Anthony Nash
▴ 20
1
vote
4
replies
2.1k
views
How do I convert kegg info on drug to a format allowing me to calculate similarities?
keggrest
chemminer
fmcsr
graph
written 6.1 years ago by
Joris.Meys
• 0
0
votes
0
replies
829
views
Downloading 3D compounds from Pubchem in ChemmineR
chemminer
6.5 years ago
jubilantsundar
• 0
1
vote
2
replies
1.4k
views
drawing chemical from smile 2D/3D
chemminer
updated 6.8 years ago by
Thomas Girke
★ 1.7k • written 6.9 years ago by
Stane
▴ 40
0
votes
0
replies
959
views
Tversky' alpha and beta should not be int, should they?
ChemmineR
7.1 years ago
stephan.struckmann
• 0
0
votes
2
replies
1.4k
views
output of propOB function ChemmineR
ChemmineR
ChemmineOB
ChemmineTools
Drug
7.2 years ago
elisa.micarelli
▴ 10
0
votes
1
reply
2.0k
views
ChemmineR package - fpSim and cmp.similarity - Tanimoto kernels
ChemmineR
updated 8.0 years ago by
Thomas Girke
★ 1.7k • written 8.0 years ago by
ረ
• 0
0
votes
0
replies
1.1k
views
MCS & ChemineR
Network
Clustering
PROcess
ChemmineR
Network
Clustering
PROcess
ChemmineR
11.1 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
1.2k
views
ChemmineR Help
Clustering
ChemmineR
Clustering
ChemmineR
11.4 years ago
Thomas Girke
★ 1.7k
15 results • Page
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Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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