Bioconductor ChemmineOB

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299

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ChemmineOB

updated 13 months ago by shepherl 3.6k • written 13 months ago by juliev • 0

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4.6k

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ChemmineOB openbabel

updated 20 months ago by dave • 0 • written 9.2 years ago by yun YAN ▴ 20

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697

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cheminf ChemmineOB Cheminformatics ChemmineR

2.3 years ago adelenelai • 0

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1.1k

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ChemmineR Chemmin ChemmineOB

2.6 years ago sukissqz • 0

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ChemmineR ChemmineOB

updated 2.8 years ago by Thomas Girke ★ 1.7k • written 3.0 years ago by teresadijor • 0

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1.0k

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software error ChemmineOB rand.h macOS

updated 3.2 years ago by khoran • 0 • written 3.2 years ago by bio.sailu • 0

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875

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ChemmineOB Linux Installation

4.7 years ago jandrosavich • 0

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ChemmineR ChemmineOB ChemmineTools Drug

6.8 years ago elisa.micarelli ▴ 10

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fingerprint FP4 ChemmineOB Rcpi

updated 7.0 years ago by Nan Xiao • 0 • written 8.1 years ago by josephjmcdonald • 0

9 results • Page 1 of 1

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Comment: DuplicateCorrelation() block by duplicate sample or by cell line ? by Gordon Smyth 49k

They are not technical replicates. With the `Exposure+CellLine` model, your experiment has only one level of variability so there is no pos…

Comment: DuplicateCorrelation() block by duplicate sample or by cell line ? by Gimena • 0

Hi James, Yes, these are complete cases. every line has all the treatment groups and technical replicates.

Comment: DuplicateCorrelation() block by duplicate sample or by cell line ? by Gimena • 0

I am sorry for the confusion. It goes like this: 3 drug exposures (vehicle, low and high dose) x 2 replicates per condition: technical re…

Comment: How does Deseq2 deal with the row with zero when calculating size factors by jiakang • 0

Thanks for your quick reply. I understand and have noticed the code you mentioned above. > the size factors results of sfType = "poscount…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Yes. I considered genome wide p value as cutoff.

Votes

Attempting to import SBML file using R

Answer: RNASeq time course analysis, missing time points for control

Answer: biomaRt not working - lazy table error

Answer: Confused about the CPM and TMM normalization in edgeR

Answer: Differential gene expression analysis

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