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CpG
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3
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2.2k
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Compute the CpG content for all chromosome like the percentage of G+C
CpG
9.2 years ago • updated 9.1 years ago
Tiphaine Martin
▴ 40
0
votes
4
replies
1.2k
views
CpG density in MEDIPS
CpG
MEDIPS
5.6 years ago
saripalligautam86
▴ 10
0
votes
1
reply
1.5k
views
CpG Sites // CG dinucleotides
CpG
CpG sites
CpG dinucleotides
updated 6.7 years ago by
Hervé Pagès
16k • written 6.7 years ago by
ibetfer3
• 0
0
votes
3
replies
1.3k
views
CpG site not annotated with annotatr
annotatr
cpg
updated 5.6 years ago by
rcavalca
▴ 140 • written 5.6 years ago by
soli5
• 0
1
vote
1
reply
6.0k
views
How to get the all CpG sites genome postion for hg19
CpG
updated 7.1 years ago by
James W. MacDonald
65k • written 7.1 years ago by
ericotorrieri
• 0
3
votes
2
replies
473
views
What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE)"?
SBE
CpG
minfi
CpGinterrogation
5 months ago
kyj2226
• 0
0
votes
0
replies
306
views
CpG coverage with MEDIPS
MEDIPS
CpG
8 months ago
greta
• 0
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Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
alex.pico
▴ 20
Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …
Comment: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
by
bandconductor
• 0
thanks! you have saved me so much time
Comment: Problem finding certain variables when importing a public database GSE73103
by
Guido Hooiveld
★ 3.9k
FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…
Votes
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
ChipQC 'names' attribute [9] must be the same length as the vector [2]'
A: DEXSeq time course design
using variable in design formula
differential expression for Single-cell RNAseq data using edgeR
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