Bioconductor DES

Showing : DES • reset

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629

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DESeq2 DES

updated 3.4 years ago by Michael Love 42k • written 3.4 years ago by heikki.sarin ▴ 10

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578

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DES DESIGN

updated 20 months ago by Michael Love 42k • written 20 months ago by mike • 0

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523

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DESeq2 des

updated 18 months ago by Michael Love 42k • written 18 months ago by Devin • 0

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431

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DESeq2 RUVSeq RUVseq BatchEffect DES

updated 26 days ago by James W. MacDonald 66k • written 26 days ago by Alexandre • 0

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248

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DESeq2 DEs

9 weeks ago feather-W • 0

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155

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Des DESeq2

updated 5 weeks ago by hemantcnaik • 0 • written 5 weeks ago by Sahar • 0

6 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Thank you so much!

Answer: recount3 problem downloading data from source sra by Leonardo Collado Torres ★ 1.0k

Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…

Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman by minardsmitha ▴ 10

Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …

Answer: Documenting resources in an `ExperimentHub` package? by James W. MacDonald 66k

The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…

Comment: ChAMP installation issue by shepherl 3.9k

We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…

Votes

Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data

Comment: Ensembl plants at annotationHub?

how to control age and gender effect in expression data using DESeq2

Answer: Error retrieving ensembl gene id using biomaRt...

Comment: LRT, more than two conditions and pairwise comparisons

Awards • All

Scholar to Mike Smith ★ 6.5k

Popular Question to mohammedtoufiq91 ▴ 10