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Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
Yang Shi
•
0
Thanks for your excellent reply sir! But there are still some points confused me. (1).dbGetQuery get 93 kinds of probes. Would be okay for …
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
by
Kevin Blighe
3.5k
Great! problem solved, then?
Answer: Is it necessary to standardize Combat in R?
by
James W. MacDonald
59k
If you already have normalized data, then there is no reason to do something else like centering or scaling the data.
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
James W. MacDonald
59k
There are some QC probes that you might use.
```
> library(pd.hg.u219)
> library(DBI)
> con <- db(pd.hg.u219)
> dbListTables(con)
[…
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