Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Dseq2
•
reset
1
vote
2
replies
287
views
Questions in Regards to LFC shrinkage in DESeq2
Dseq2
RNASeqData
apeglm
9 weeks ago
Gordon
• 0
2
votes
2
replies
768
views
Inccorect group number in DGEList
edgeR
Bioconductor
Dseq2
dgelist
updated 22 months ago by
Gordon Smyth
51k • written 22 months ago by
Fiona
• 0
0
votes
1
reply
985
views
Dseq2 gives the same results no matter the condition ???
dseq2
6.3 years ago
Bioinformatics
▴ 30
3 results • Page
1 of 1
Recent ...
Replies
Comment: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
by
ATpoint
★ 4.5k
For the general audience, reticulate / python (which basilisk depends on / wraps) requires explicit declaration of integers, so one needs i…
Answer: Average expression of genes across replicates
by
ATpoint
★ 4.5k
Not sure what you're asking. The average expression across all samples is what the `baseMean` column of `results()` returns. This is simply…
Answer: Spike-in normalization method in ATACseq
by
ATpoint
★ 4.5k
This is unrelated to Bioconductor. You should reach out to the company tech support and ask for details of their product.
Answer: single cell RNA seq pseudobulk batch correction
by
James W. MacDonald
67k
You can exclude the females from the non-responders.
Answer: Normalized counts to be used in decoupleR from deseq2 results
by
James W. MacDonald
67k
No, you never use normalized counts for anything but plotting. Can you point out the example that uses normalized counts?
Votes
Answer: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
Comment: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
Comment: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
Awards
• All
Commentator
to
Mike Smith
★ 6.6k
Popular Question
to
Guido Hooiveld
★ 4.1k
Popular Question
to
Gordon Smyth
51k
Popular Question
to
kyj2226
• 0
Popular Question
to
shepherl
4.1k
Locations
• All
Germany,
14 minutes ago
France,
18 minutes ago
The city by the bay,
1 hour ago
Macao,
1 hour ago
WEHI, Melbourne, Australia,
2 hours ago
Traffic: 563 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6