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GOTerm
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4
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14
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GO term gene ontology enrichment analysis
GOTerm
2.2 years ago
Amazing570
• 0
0
votes
0
replies
803
views
RDAVIDWebService Package Official Gene Symbol IDs in GO Term Tables
RDAVIDWebService
Gene Ontology
GOTerm
biomaRt
3.9 years ago
ra711
• 0
2
votes
1
reply
604
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GO term "GO:1904936 interneuron migration" not found using biomart
biomart
goterm
updated 4.1 years ago by
Mike Smith
★ 6.5k • written 4.1 years ago by
A
• 0
0
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3
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1.3k
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DESeq2-->GO term heat map
deseq2
goterm
updated 5.4 years ago by
Michael Love
42k • written 5.4 years ago by
shaunnak
• 0
1
vote
1
reply
1.2k
views
Goseq output with too many GO terms per category
go
goseq
goterm
category
updated 5.8 years ago by
Gordon Smyth
50k • written 5.8 years ago by
Juan
• 0
5 results • Page
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Comment: Slightly different count plots from R and spreadsheet
by
ATpoint
★ 4.1k
I don't think it is the purpose of the support site to debug Excel behaviour. The issue might be how it combines replicates into a single v…
Comment: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
Karosham.Reddy
• 0
Hi, I am having the same issues. What was the typo that you found? And were you able to solve the next problem?
Comment: recount3 problem downloading data from source sra
by
PABLO ANTONIO
• 0
Hello Leonardo, Thanks for commenting on possible solutions. I noticed comparing your session info that I was using the previous version o…
Comment: seqlevelsStyle() not working
by
websterdelacruz2087055
• 0
Specify the new URL new_url <- "https://hgdownload2.cse.ucsc.edu/goldenPath/hg19/database/chromInfo.txt.gz" Use the new URL to download th…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Yes, thank you. I have another error now, may you please guide me. here is the code that I used till using vep: ```r # bam_path <- "~/pat…
Votes
Including squared covariates to account for non-linear dependencies in differential gene expression analysis
DESeq2 DE gene expression of scRNA-seq pseudobulk
Answer: Multiple factor DSEq2 result generates weird volcano plot
DESeq2 for single cell pseudobulk processing
Simultaneously adding two different covariates in the model gives error in DESeq2.
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