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GeneAnswers
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1.3k
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NCI pathways to graphNEL
Pathways
graph
Rredland
GeneAnswers
Pathways
graph
Rredland
GeneAnswers
13.3 years ago
laurent jacob
▴ 100
0
votes
2
replies
1.3k
views
question about xvfb-run GeneAnswers
GO
GeneAnswers
GO
GeneAnswers
updated 12.7 years ago by
James W. MacDonald
66k • written 12.7 years ago by
Ou, Jianhong
★ 1.3k
0
votes
2
replies
1.1k
views
Gene Ontologies exploration
goProfiles
GeneAnswers
goProfiles
GeneAnswers
updated 11.3 years ago by
Marc Carlson
★ 7.2k • written 11.3 years ago by
Jose M Garcia Manteiga
▴ 310
1
vote
2
replies
1.9k
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GeneAnswer for bacteria metagenomes
geneanswers
metagenome
kegg
updated 7.9 years ago by
Guangchuang Yu
★ 1.2k • written 9.5 years ago by
francesca.defilippis
▴ 100
0
votes
1
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1.3k
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Error running GeneAnswers and Rgraphviz
Rgraphviz
GeneAnswers
Rgraphviz
GeneAnswers
updated 13.4 years ago by
Manca Marco PATH
▴ 340 • written 13.4 years ago by
john herbert
▴ 10
0
votes
0
replies
845
views
categories can not be recognized in Bioconductor/GeneAnswers
geneanswers
updated 7.4 years ago by
Gordon Smyth
50k • written 7.4 years ago by
emiliomastriani
• 0
0
votes
0
replies
1.4k
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Re: GenesAnswers for Arabidopsis!
GeneAnswers
annotation
Arabidopsis
GO
9.0 years ago
lhuang7
▴ 50
0
votes
0
replies
872
views
Pie chart
GO
GeneAnswers
GO
GeneAnswers
12.6 years ago
Guest User
★ 13k
0
votes
0
replies
922
views
question about getGOList in GeneAnswers
GO
GeneAnswers
GO
GeneAnswers
12.1 years ago
Zhi Zhang
▴ 70
0
votes
0
replies
970
views
help ith GeneAnswers / annotation package
Annotation
GO
oligo
GeneAnswers
Annotation
GO
oligo
GeneAnswers
11.6 years ago
Ingrid Mercier
▴ 60
0
votes
0
replies
964
views
[Geneanswers] About the meaning of colours in networks
Network
GeneAnswers
Network
GeneAnswers
11.5 years ago
Enrico Ferrero
▴ 10
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Comment: conumee with Infinium MethylationEPIC v2.0
by
Maximus
• 0
Hi Sole, If there is a combined mixture of MSet of 450K, EPIC and EPICv2, how should I create an annotation object? I tried to create anno…
Comment: Volcano plot of scRNA-seq data not "centered"
by
tjl
• 0
Thank you both. The code is below, simplified a bit for simplicity. ATpoint, your suggestion re: the top 20% of genes by baseMean makes me …
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
Wait a minute. The `oligo` package is *supposed to* be using `zlibbioc`, but apparently it is not. I get the same thing as you do, where it…
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
There is the `zlibbioc` package that provides the headers for zlib 1.2.5, that I think you should be able to use, although that would requi…
Answer: GSVA function
by
Robert Castelo
★ 3.3k
Hi, We recommend to input normalized expression values in logarithmic scale to GSVA. We also recommend to use the latest release of the …
Votes
DESeq2 swap ensembl gene id rownames with gene symbol column
A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge
DESeq2: add annotations (from data frame) to DESeqDataSet
Add new columns to DESeqResults from text file by matching rownames.
DESeq2: LRT or WALD guidance
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