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IONiseR
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IONiseR error when using the readFast5Summary function on nanopore data
ioniser
software error
bioconductor
7.6 years ago • updated 7.5 years ago
mv340788
• 0
3
votes
8
replies
1.8k
views
Problem with readFast5Summary in IONiseR related to HDF5
ioniser
bioinformatics
minion
updated 6.6 years ago by
Lescai, Francesco
▴ 380 • written 7.1 years ago by
nathaniellegall
• 0
0
votes
4
replies
1.1k
views
IONiseR readFast5Summary Error
ioniser
7.2 years ago
ferrato
• 0
0
votes
3
replies
1.0k
views
IONiseR error when trying to call readFast5Summary on fast5 reads
IONiseR
updated 7.2 years ago by
Mike Smith
★ 6.5k • written 7.2 years ago by
artemd
• 0
0
votes
2
replies
915
views
ONiseR readFast5Summary Error
IONiseR
updated 7.7 years ago by
Mike Smith
★ 6.5k • written 7.7 years ago by
kaganr
• 0
0
votes
2
replies
834
views
Problem with the readFast5Summary command
ioniser
updated 7.1 years ago by
Mike Smith
★ 6.5k • written 7.1 years ago by
ferrato
• 0
0
votes
1
reply
916
views
IONiseR readFast5Summary Error H5Aopen(gid, "num_events")
IONiseR
Minion
updated 7.3 years ago by
Mike Smith
★ 6.5k • written 7.3 years ago by
christophe.klopp
• 0
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Comment: Help with running egsea()
by
James W. MacDonald
65k
I don't understand the last question, but do look at the msigdb.gsets argument to `buildIdx` in the help page for that function.
Answer: Help with running egsea()
by
James W. MacDonald
65k
There are no arguments to `egsea.base`, as it is meant only as a helper function to return the different methods. In addition, if you are u…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I am working with mouse data. I don't know how to do this, but I will go through it. Can you help me with the second question? how do we …
Comment: [Mfuzz] Error in cmeans(exprs(eset)
by
Caio
• 0
You can have this problem (lines with variance equal to zero) when you run experiments and obtain the data with more samples and use fewer …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The left plot indicates you should use genome segmentation. It is what is called "nonstationary" meaning it looks like there are distinct r…
Votes
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
Answer: How to save the DEXSeq results
Answer: Help with running egsea()
Answer: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
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