Bioconductor LIMMA

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Metabolomics limma

updated 18 hours ago by Gordon Smyth 50k • written 23 hours ago by c53aba27 • 0

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177

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CAMERA limma

3 days ago • updated 2 days ago Chris • 0

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214

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GEOquery ArrayExpress limma DifferentialExpression

updated 3 days ago by James W. MacDonald 65k • written 4 days ago by SSSJec • 0

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150

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limma RNASeq voom

written 10 days ago by taur.vil • 0

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1.1k

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limma

13 days ago • updated 1 day ago Chris • 0

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1.9k

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limma

4 weeks ago • updated 3 days ago Chris • 0

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1.1k

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limma microarray statistics

updated 2 days ago by XW • 0 • written 7.9 years ago by tati6406 • 0

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1.5k

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limma limma

updated 2 days ago by XW • 0 • written 13.0 years ago by Babara Mueller ▴ 10

8 results • Page 1 of 1

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Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k

You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…

Comment: Timecourse RNASeq analysis by Aurora • 0

I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

But.. How to run a temporal assay?

Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

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A: Print Differentially Expressed Exons From Dexseq Results

stuck on unimplemented type 'list' in 'EncodeElement'

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

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