Bioconductor MultipleComparison

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220

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limmaGUI lim MultipleComparison multip

updated 11 weeks ago by Gordon Smyth 50k • written 11 weeks ago by roger.moreno.justicia • 0

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687

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Linnorm DEG MultipleComparison

updated 6 months ago by shunyip • 0 • written 2.8 years ago by awakumaya • 0

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750

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Proteomics proDA MultipleComparison

8 months ago t.b.n.nguyen-9 • 0

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664

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MultipleComparison DESeq2 Genetics contrasts RNASeq

updated 9 months ago by James W. MacDonald 65k • written 10 months ago by a26fd14e • 0

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665

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DESeq2 MultipleComparison r

updated 16 months ago by Michael Love 41k • written 17 months ago by ncorak • 0

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552

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MultipleComparison DESeq2

updated 24 months ago by Michael Love 41k • written 24 months ago by Joshua • 0

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2.2k

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MultipleComparison edgeR DESeq2

written 2.1 years ago by yuet • 0

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669

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factor DESeq2 MultipleComparison

updated 2.5 years ago by swbarnes2 ★ 1.3k • written 2.5 years ago by diegocastano182 • 0

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967

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GeneExpression R limma MultipleComparison

updated 3.4 years ago by James W. MacDonald 65k • written 3.4 years ago by Gwénolé • 0

9 results • Page 1 of 1

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Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k