Bioconductor MultipleComparison

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2.2k

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MultipleComparison edgeR DESeq2

written 2.1 years ago by yuet • 0

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967

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GeneExpression R limma MultipleComparison

updated 3.4 years ago by James W. MacDonald 65k • written 3.4 years ago by Gwénolé • 0

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750

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Proteomics proDA MultipleComparison

8 months ago t.b.n.nguyen-9 • 0

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552

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MultipleComparison DESeq2

updated 24 months ago by Michael Love 41k • written 24 months ago by Joshua • 0

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664

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MultipleComparison DESeq2 Genetics contrasts RNASeq

updated 9 months ago by James W. MacDonald 65k • written 10 months ago by a26fd14e • 0

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666

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DESeq2 MultipleComparison r

updated 16 months ago by Michael Love 41k • written 17 months ago by ncorak • 0

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669

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factor DESeq2 MultipleComparison

updated 2.5 years ago by swbarnes2 ★ 1.3k • written 2.5 years ago by diegocastano182 • 0

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687

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Linnorm DEG MultipleComparison

updated 6 months ago by shunyip • 0 • written 2.8 years ago by awakumaya • 0

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220

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limmaGUI lim MultipleComparison multip

updated 11 weeks ago by Gordon Smyth 50k • written 11 weeks ago by roger.moreno.justicia • 0

9 results • Page 1 of 1

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Comment: Couldn't connect to server while using "pathways" by ATpoint ★ 4.1k

Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k