Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Polyester
•
reset
0
votes
7
replies
1.8k
views
Using Polyester to simulate large number of reads from a large transcriptome
polyester
rnaseq
updated 7.9 years ago by
jmfu
▴ 10 • written 7.9 years ago by
aditya892
• 0
0
votes
2
replies
1.5k
views
RNA-seq read simulation for benchmarking differential expression/splicing variance
polyester
simulation
RNA-seq
syntheticdata
updated 3.5 years ago by
Gordon Smyth
50k • written 3.5 years ago by
Endre Sebestyén
▴ 70
0
votes
2
replies
1.4k
views
How to simulate a count matrix using Polyester
simulation
count matrix
RNA-seq
Polyester
updated 6.4 years ago by
Alyssa Frazee
▴ 210 • written 6.4 years ago by
fa.gholizadeh89
• 0
2
votes
1
reply
1.4k
views
polyester: adding noise to RNASeq counts?
rnaseq
polyester
updated 7.8 years ago by
Alyssa Frazee
▴ 210 • written 7.8 years ago by
krishna312
• 0
0
votes
0
replies
1.1k
views
Polyester - creating simulated reads based on raw count matrix
polyester
rnaseq
simulation
6.7 years ago
sseo2
• 0
0
votes
0
replies
977
views
Could an experienced user of Polyester help me with some questions?
rna-seq
polyester
simulation
time course
6.4 years ago
fa.gholizadeh89
• 0
0
votes
1
reply
674
views
Error message
polyester
updated 3.2 years ago by
shepherl
3.9k • written 3.2 years ago by
avaniknejad686
• 0
0
votes
0
replies
605
views
Polyester - simulate_experiment_countmat with gtf
polyester
4.1 years ago
liorglic
▴ 10
1
vote
0
replies
599
views
Polyester's simulate_experiment man pages / vignette description
polyester
4.6 years ago
Michael Love
41k
0
votes
0
replies
554
views
Range value of the dispersion parameters (a1, alpha 0 and sigmad)
polyester
dispersion
updated 3.1 years ago by
Michael Love
41k • written 3.1 years ago by
catalina.gonzalez-gomez
• 0
0
votes
0
replies
455
views
polyester running question
polyester
18 months ago
Seongwoo Han
▴ 10
0
votes
1
reply
422
views
polyester biases
polyester
updated 12 months ago by
Michael Love
41k • written 12 months ago by
Seongwoo Han
▴ 10
12 results • Page
1 of 1
Recent ...
Replies
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Answer: Handling multiple differential expression comparisons
by
Michael Love
41k
It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…
Comment: Too many significant genes when integrating gtex and tcga
by
ATpoint
★ 4.1k
These two datasets are from completely different experiments / batches. It is utterly meaningless to compare them. I would suggest comparat…
Votes
Print Differentially Expressed Exons From Dexseq Results
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Awards
• All
Popular Question
to
Sam
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
• 0
Popular Question
to
Theo
▴ 10
Popular Question
to
gene_bioconductor
▴ 10
Locations
• All
India,
2 minutes ago
Italy,
3 minutes ago
France,
19 minutes ago
France,
19 minutes ago
EMBL Heidelberg,
30 minutes ago
Traffic: 427 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6