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First principal component variance stabilised RNA-seq data correlates with total read counts per sample / library concentration
RNA-seq
PCA
control
DESeq2
Quality
3.7 years ago • updated 3.6 years ago
9906201a
▴ 20
0
votes
0
replies
920
views
AffyExpress choose relative path folder
folder
quality
QualityControl
AffyExpress
4.9 years ago
bastien_chassagnol
• 0
0
votes
1
reply
1.2k
views
Array quality metrics for large sample size
microarray
quality
updated 6.8 years ago by
Wolfgang Huber
★ 13k • written 6.8 years ago by
RV
▴ 10
0
votes
3
replies
2.8k
views
what does "mean base quality" mean?
base quality
quality
mean base quality
updated 9.1 years ago by
Mike Smith
★ 6.6k • written 9.1 years ago by
christiangriffioen
• 0
4 results • Page
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Comment: upstream git branches of bioc-release
by
andres.wokaty
▴ 70
Yes, all packages in https://bioconductor.org/packages/json/3.22bioc/packages.json have a `RELEASE_3_22` branch.
Comment: upstream git branches of bioc-release
by
Jeroen
▴ 10
Can we assume that each package git repo will have a `RELEASE_3_22` branch, even when they had "a build error in release"?
Comment: upstream git branches of bioc-release
by
andres.wokaty
▴ 70
The https://bioc-release.r-universe.dev should follow `RELEASE_3_22` for all packages. The packages that show `git_branch` as `devel` don'…
Comment: gene Set with high AUC score but no cells assigned to cell type
by
gogeni5529
• 0
THIS is spam. How Do I delete it?
Comment: limpa - drivers for unusually high standard error?
by
Julia Broadbent
• 0
Apologies for not being clearer in my initial question, but thank you for answering regardless! The large SE values I am looking at appear …
Votes
Comment: upstream git branches of bioc-release
A: p.adjust BH generates duplicate values
Answer: gene Set with high AUC score but no cells assigned to cell type
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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