Bioconductor RBGL

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1.2k

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RBGL RBGL

21.4 years ago Roels, Steven ▴ 50

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1.2k

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RBGL RBGL

updated 21.4 years ago by Jeff Gentry ★ 3.9k • written 21.4 years ago by Jeff Lande ▴ 110

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1.4k

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GO Biobase annotate genefilter graph RBGL GOstats GO Biobase annotate genefilter graph

updated 21.5 years ago by rgentleman ★ 5.5k • written 21.5 years ago by Dr Gyorffy Balazs ▴ 320

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1.5k

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Microarray Clustering Cancer affy graph SAGElyzer Rgraphviz Rdbi RBGL Microarray Cancer

updated 22.3 years ago by Douglas Bates ▴ 180 • written 22.3 years ago by Baker, Stephen ▴ 160

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2.5k

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Ruuid genefilter rhdf5 multtest affy graph Rgraphviz RBGL Ruuid genefilter rhdf5 affy

updated 22.3 years ago by Vincent J. Carey, Jr. 6.7k • written 22.3 years ago by Weiming Zhang ▴ 30

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1.7k

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Biobase Ruuid DynDoc tkWidgets affy graph Rgraphviz AnnBuilder RBGL PROcess Biobase

22.8 years ago madman@jimmy.harvard.edu ▴ 850

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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k

Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/

Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k

apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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