Bioconductor TxDb.Mmusculus.UCSC.mm9.knownGene

Showing : TxDb.Mmusculus.UCSC.mm9.knownGene • reset

0

votes

2

replies

918

views

TxDb.Mmusculus.UCSC.mm9.knownGene ensembldb GenomicFeatures Mus_musculus

written 20 months ago by ramonmassoni ▴ 10

7

votes

11

replies

6.2k

views

annotatePeak chipseeker chipseq org.Mm.eg.db TxDb.Mmusculus.UCSC.mm9.knownGene

updated 10.0 years ago by Martin Morgan 25k • written 10.2 years ago by Elsa • 0

3

votes

2

replies

2.1k

views

software error txdb.mmusculus.ucsc.mm9.knowngene genomicfeatures

updated 10.7 years ago by Hervé Pagès 16k • written 10.7 years ago by nathan.harmston • 0

3 results • Page 1 of 1

Recent ...

Replies

Comment: Help with defining groups by Phinney, Brett ▴ 10

I got it working , thank you!!!

Comment: Check removeBatchEffect effectiveness by massimo • 0

I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…

Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Votes

Comment: Check removeBatchEffect effectiveness

Awards • All