Bioconductor WEHI

Showing : WEHI • reset

0

votes

0

replies

981

views

australia cancer wehi

3.6 years ago • updated 3.2 years ago Gordon Smyth 52k

1

vote

0

replies

1.4k

views

australia wehi Job

8.1 years ago Gordon Smyth 52k

1

vote

0

replies

1.5k

views

australia wehi Job

8.1 years ago Gordon Smyth 52k

2

votes

0

replies

2.2k

views

WEHI Australia Job

9.6 years ago • updated 9.5 years ago Gordon Smyth 52k

4 results • Page 1 of 1

Recent ...

Replies

Comment: lfcShrink and alpha value by cropero • 0

Thank you so much! Would that be equivalent to perform `res <- results(dds, contrast = c("conditions", "wild_type_114_2_no_carbon", "wild_t…

Comment: pathview - multiple states by Philippine • 0

Thank you! Here a subset of genes that really works with "ame04145". data <- data.frame( EntrezID = c(100577548, 100577764, 406…

Comment: pathview - multiple states by Guido Hooiveld ★ 4.1k

A quick comment after I copied/pasted your code: when using `geneList1` in the 3rd code chunk I do **not** get a nice plot... I rather got …

Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data by Adam • 0

Hi Aaron, Thanks a lot for your help! As you mentioned, I checked my data and it is "DelayedMatrix". I don't know the detailed differe…

Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data by Aaron Lun ★ 28k

You don't mention how your matrix data is being represented, but if it's a file-backed matrix (e.g., `HDF5Matrix` or one of its variants, b…

Votes

Answer: contrast matrix design for a continuous variable

A: What's the difference between p.adjust and qvalue?

Answer: DESeq2- merging technical vs biological replicates

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

Awards • All

Popular Question to Ou, Jianhong ★ 1.3k