Showing : cancer • reset
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181
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Job: Computational Biology Lab Head, Brain Cancer Centre, Melbourne, Australia
australia cancer wehi
5 months ago • updated 5 weeks ago Gordon Smyth 43k
0
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0
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166
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Job: Cancer Bioinformatician @ University of East Anglia - Norwich Medical School, UK
cancer postdoc biomarkers Biobase
6 months ago Daniel Brewer ▴ 90
0
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0
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218
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Job: Senior Research Associate in Bioinformatics @ University of East Anglia - Norwich Medical School, UK
Biobase bioinformatics biomarkers cancer
10 months ago Daniel Brewer ▴ 90
0
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0
replies
241
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Job: Postdoctoral Data Scientist @ Oxford University, UK
Cancer CancerSubtypes postdoc
11 months ago Daniel Brewer ▴ 90
2
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13
replies
347
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Sample size imbalance in a multi-regional experiment
deseq2 cancer
updated 12 months ago by 34k • written 12 months ago by • 0
4
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7
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369
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Limma sample groups
microarray limma affy cancer
updated 12 months ago by 43k • written 12 months ago by • 0
0
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5
replies
309
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TCGA: to extract clinical data from barcode
cancer TCGAbiolinks
updated 13 months ago by 3.4k • written 13 months ago by ▴ 10
1
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5
replies
343
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TCGA: clinical data and expression data
microarray annotation cancer
updated 13 months ago by 3.4k • written 13 months ago by • 0
0
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5
replies
335
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Differential expression analysis of multiple RNA-seq datasets using DESeq2
deseq2 cancer
updated 13 months ago by 34k • written 13 months ago by • 0
0
votes
0
replies
229
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Job: Senior Postdoc/Bioinformatician Research Fellow @ UEA, Norwich, UK - New deadline
cancer nextgenerationsequencing prostate Job
20 months ago • updated 15 months ago Daniel Brewer ▴ 90
4
votes
10
replies
492
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how to analyze WGCNA results?
cancer probe deseq2 annotation normalization
updated 17 months ago by 3.4k • written 17 months ago by ▴ 10
1
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2
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225
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Partial NA coefficients for 10 probe(s) Limma
limma microarray cancer
updated 17 months ago by 3.4k • written 18 months ago by • 0
0
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3
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212
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Topgo, Deseq and KEGG pathway
annotation cancer
updated 18 months ago by 2.8k • written 18 months ago by • 0
0
votes
1
reply
191
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WGCNA analysis on RNAseq and proteoimcs data
cancer
updated 18 months ago by ★ 2.6k • written 18 months ago by • 0
0
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0
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301
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Job: Computational Biology & Bioinformatics Postdoctoral Research Associate / Research Assistant (Fixed Term) in (Epi)Genomic Regulation of Cancer @ Unive…
cancer computational biology bioinformatics epigenetics Job
20 months ago • updated 19 months ago Shamith.Samarajiwa ▴ 180
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0
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211
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Job: Data Sciences Statistician - Dana-Farber Cancer Institute
job data science biostatistics bioinformatics cancer Job
19 months ago Patrick Kimes ▴ 10
0
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0
replies
325
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Job: postdoc position in computational cancer biology in Milan, Italy
cancer networks genomics epigenomics Job
23 months ago • updated 21 months ago marschaefer • 0
0
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0
replies
184
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Methylmix results are a bit different from beta values results
cancer methylmix methylation betavalues DMvalues
21 months ago luciomora8 • 0
0
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0
replies
250
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Job: Part-time postdoc in Bioinformatics (0.5 FTE) @ UEA, Norwich, UK
cancer biomarkers bioinformatician Job
23 months ago Daniel Brewer ▴ 90
2
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2
replies
272
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DESeq2: DE Analysis with very imbalanced samples per condition
deseq2 cancer
updated 23 months ago by 34k • written 23 months ago by • 0
0
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0
replies
156
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miRNA and drugs
cancer
23 months ago maria.k.pagoni • 0
1
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0
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324
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Job: PhD Studentship in Computational Biology and Machine Learning @ University of Cambridge (application deadline November 15th 2019)
cancer genomics deep learning computational biology Job
2.0 years ago • updated 24 months ago Shamith.Samarajiwa ▴ 180
1
vote
0
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380
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Job: Research Assistant/Research Associate in Machine Learning and Computational Biology (fixed-term - closing date is Sunday 20th October 2019) @ Univers…
deep-learning cancer immunotherapy computational biology Job
2.1 years ago • updated 24 months ago Shamith.Samarajiwa ▴ 180
0
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0
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364
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Job: Bolzano, Italy: Post Doc Researcher in bioinformatics of cancer epigenomics
cancer Job
2.0 years ago Johannes Rainer ★ 1.9k
1
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4
replies
361
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Identify recurrent isoform switches using IsoformSwitchAnalyzeR in multiple rectal tumor samples
cancer Isoform limma IsoformSwitchAnalyzeR
updated 2.0 years ago by ▴ 100 • written 2.0 years ago by • 0
2
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1
reply
703
views
How to perform a differential expression analysis from TCGA file EBPlusPlusAdjustPANCAN_IlluminaHiSeq_RNASeqV2.geneExp.tsv
cancer limma deseq2
updated 2.0 years ago by ▴ 780 • written 2.0 years ago by ▴ 10
0
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0
replies
254
views
Job: Bioinformatician @ University of Cambridge
cancer bioinformatics R Job
2.0 years ago Shamith.Samarajiwa ▴ 180
0
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0
replies
317
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Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
2.1 years ago sheneicechang • 0
0
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0
replies
210
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News: Bay area Biotech-Pharma Statistics Workshop, with free R user meetup (Nov 6-8)
cancer meetup News
2.1 years ago Ning Leng • 0
0
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5
replies
695
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RNA-seq time course analysis with only one experimental condition
deseq2 cancer rna-seq time-series
2.2 years ago mah19 • 0
0
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0
replies
200
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MatchGenes in Bumphunter - result list with multiple genes
cancer
2.3 years ago hanna_engqvist • 0
1
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0
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862
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Job: Research Assistant position (Fixed Term -12 months initially - application deadline 9th June) in Machine Learning & Computational Cancer Genomics @ …
cancer deep learning genomics Job
2.5 years ago • updated 2.4 years ago Shamith.Samarajiwa ▴ 180
0
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0
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280
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Job: Post-doctoral Fellow - Aparicio Lab @ BC Cancer Research Center, Vancouver BC Canada
single cell genome cancer Job
2.4 years ago jmaanaki • 0
0
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2
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250
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Chromosomal location mapping for miRNAs
cancer
updated 2.4 years ago by 58k • written 2.4 years ago by ▴ 10
0
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3
replies
303
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Is Background Correction necessary before DESeq analysis
deseq2 cancer
updated 2.4 years ago by 34k • written 2.4 years ago by • 0
1
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4
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354
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DESeq2:Why is there an oblique line in my MA picture, which happened before, what caused this?
deseq2 cancer
updated 2.4 years ago by 34k • written 2.4 years ago by • 0
3
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1
reply
3.3k
views
WGCNA-unable to install GO.db package
go cancer
updated 2.5 years ago by 25k • written 2.5 years ago by ▴ 20
0
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1
reply
258
views
Help installing netReg
netReg cancer
2.5 years ago sbrackett007 • 0
2
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4
replies
480
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SCAN.UPC : lost too many samples from GSE (BrainArray + ConvThreshold)
SCAN.UPC probe normalization GEOdata cancer
2.5 years ago s.goncalvesclaro ▴ 10
0
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0
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344
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Job: Summer Studentships in Data Science & Computational Biology (2019) at the University of Cambridge
R Python Computational-Biology Cancer Job
2.5 years ago Shamith.Samarajiwa ▴ 180
0
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0
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481
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Job: Research Fellow, Computational Multi-Omics of Cancer (University College London)
cancer multi-omics genomic instability machine learning data integration Job
2.5 years ago msecrier ▴ 20
6
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7
replies
498
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Appropriate experimental design for differential expresion
edgeR normalization cancer
updated 2.6 years ago by ▴ 890 • written 2.6 years ago by ▴ 30
0
votes
1
reply
276
views
Getting a signature specific to each patient
DESeq2 r cancer
updated 2.6 years ago by 58k • written 2.6 years ago by ▴ 30
0
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0
replies
307
views
Job: Postdoctoral Research Fellowship: Computational Biology & Cancer Immunotherapy
cancer Job
2.6 years ago luznile • 0
0
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2
replies
1.3k
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Web Scraping From Pubmd (I want to extract gene articles form pubmed abstract and pubmed id i want to extract for number of genes)
cancer gene
updated 2.6 years ago by 25k • written 2.6 years ago by • 0
2
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0
replies
430
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Job: Research Fellow, Computational Cancer Genomics (University College London)
cancer genomics machine learning data integration multi-omics Job
2.7 years ago msecrier ▴ 20
2
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5
replies
616
views
edgeR or wilcoxon rank test? Which is right?
edgeR r wilcox RNA-seq cancer
2.7 years ago Fereshteh ▴ 30
2
votes
3
replies
436
views
Batch correction for a sets of genes
cancer deseq2 r rnaseq
updated 2.7 years ago by 34k • written 2.7 years ago by ▴ 30
0
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1
reply
543
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 2.8 years ago by 58k • written 2.8 years ago by • 0
0
votes
2
replies
943
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Solexa fastq files and BLAT
Cancer Biostrings ShortRead Cancer Biostrings ShortRead
updated 2.8 years ago by 0 • written 12.8 years ago by ★ 1.9k
50 results • Page 1 of 1
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Comment: My "Ask a Question" post has been flagged as spam - it is not by ladypurrsia • 0
Thank you very much.
Answer: My "Ask a Question" post has been flagged as spam - it is not by Gordon Smyth 43k
I have manually marked your previous post as not-spam. I agree that your previous post does not show any characteristics that would justify…
Comment: DESeq2 error in design~ code by Abdou-samad • 0
Thank you very much
Comment: Error connecting to external databases through celldex by swbarnes2 ▴ 890
That line of code works. I don't think that's the right location for the data, because I can get to it by browser, so my org has not locke…
Answer: DESeq2 PCA by swbarnes2 ▴ 890
Didn't you google the function? https://www.rdocumentation.org/packages/DESeq2/versions/1.12.3/topics/plotPCA > Arguments > obj…
Votes
Answer: My "Ask a Question" post has been flagged as spam - it is not
A: DESeq2 for big data sets
Answer: Extracting a list of genes from the Gene Expression Omnibus with Geoquery.
Answer: Error connecting to external databases through celldex
Answer: Error connecting to external databases through celldex
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