Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
awards
•
reset
1
vote
0
replies
863
views
News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
19 months ago • updated 17 months ago
shepherl
4.2k
1
vote
0
replies
668
views
News:
Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
20 months ago
shepherl
4.2k
0
votes
0
replies
636
views
News:
May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor
Awards
Bioc2023
Recognition
2.4 years ago
shepherl
4.2k
1
vote
0
replies
944
views
News:
Last Week to Nominate for Bioc2023 Awards!
Bioconductor
Bioc2023
Recognition
Awards
2.4 years ago
shepherl
4.2k
0
votes
0
replies
869
views
News:
Junior Developer or New Package Developer Award
Bioconductor
Recognition
Bioc2023
Awards
2.5 years ago • updated 2.4 years ago
shepherl
4.2k
0
votes
0
replies
962
views
News:
Bioconductor Community Engagement, Outreach, and Diversity Award
Awards
Bioconductor
Bioc2023
Recognition
2.5 years ago • updated 2.4 years ago
shepherl
4.2k
0
votes
0
replies
954
views
News:
Bioconductor Long-term Contribution Award
Bioc2023
Bioconductor
Awards
Recognition
2.5 years ago • updated 2.4 years ago
shepherl
4.2k
0
votes
0
replies
847
views
News:
Nominations for Bioconductor 2023 Awards!
Awards
Bioconductor
Bioc2023
Recognition
2.5 years ago • updated 2.4 years ago
shepherl
4.2k
0
votes
1
reply
1.1k
views
News:
Bioconductor Scientific or Informatic Technology Advancement Award!
Recognition
Awards
Bioc2022
Bioconductor
written 3.5 years ago by
shepherl
4.2k
1
vote
2
replies
1.5k
views
News:
Nominations for Bioconductor 2022 Awards!
Bioc2022
Awards
Bioconductor
Recognition
written 3.6 years ago by
shepherl
4.2k
0
votes
0
replies
894
views
News:
Junior Developer or New Package Developer Award
Recognition
Awards
Bioc2022
Bioconductor
3.5 years ago
shepherl
4.2k
0
votes
0
replies
920
views
News:
Bioconductor Long-term Contribution Award
Recognition
Awards
Bioc2022
Bioconductor
3.5 years ago
shepherl
4.2k
0
votes
0
replies
855
views
News:
Support Site Bioconductor Award
Recognition
Awards
Bioc2022
Bioconductor
3.5 years ago
shepherl
4.2k
0
votes
0
replies
963
views
News:
Bioconductor Community Engagement, Outreach, and Diversity Award
Bioc2022
Awards
Bioconductor
Recognition
3.6 years ago
shepherl
4.2k
0
votes
0
replies
964
views
News:
Bioconductor Award for Outstanding Documentation
Bioc2022
Awards
Bioconductor
Recognition
3.6 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Nominations for Bioconductor 2021 Awards!
Bioconductor
Bioc2021
Recognition
Awards
4.4 years ago
shepherl
4.2k
0
votes
0
replies
1.0k
views
News:
Long-term Bioconductor Contribution Award
Bioconductor
Bioc2021
Recognition
Awards
4.4 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Scientific or Informatic Technology Advancement Award!
Bioconductor
Bioc2021
Recognition
Awards
4.4 years ago
shepherl
4.2k
1
vote
0
replies
1.0k
views
News:
Bioconductor Award for Outstanding Documentation
Bioc2021
Awards
Recognition
Bioconductor
4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Community engagement, outreach, and diversity award
awards
bioc2021
recognition
community
Bioconductor
4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Support Site Bioconductor Award
recognition
awards
bioc2021
Bioconductor
4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Nominations for Bioconductor 2021 Awards!
Awards
Recognition
Bioconductor
Bioc2021
4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Award Nomination Deadline Monday June 15th!
bioc2020
awards
bioconductor
recognition
News
5.4 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Scientific or Informatic Technology Advancement Award!
bioconductor
bioc2020
awards
advancement
new technology
News
5.4 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Long-term contribution award
bioc2020
bioconductor
lifetime
recognition
awards
News
5.4 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Support Site Bioconductor Award
bioconductor
bioc2020
awards
recognition
News
5.4 years ago
shepherl
4.2k
4
votes
1
reply
4.2k
views
News:
Nominations for Bioconductor Awards!
Bioc2020
Bioconductor
Awards
Recognition
News
5.5 years ago • updated 5.4 years ago
shepherl
4.2k
27 results • Page
1 of 1
Recent ...
Replies
Answer: Using DESeq2 for age prediction
by
ATpoint
★ 5.0k
The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
Very strange. We have the same package versions. I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…
Comment: DESeq2 for candidate gene analysis
by
piffelpaff
▴ 20
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis
by
Michael Love
43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Votes
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
Awards
• All
Popular Question
to
Gordon Smyth
53k
Popular Question
to
Matej
• 0
Popular Question
to
Hervé Pagès
16k
Popular Question
to
Josef Frank
• 0
Popular Question
to
dan.gatti
• 0
Locations
• All
WEHI, Melbourne, Australia,
27 minutes ago
United States,
56 minutes ago
United States,
1 hour ago
The city by the bay,
1 hour ago
United States,
1 hour ago
Traffic: 713 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6